Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02652 ATGGCGACAAGTGCTATGATTTCAACTCTTATGGCTATGCTATGTCTATCCATCACACATGGATTGAATGAAATCCCAATTCCTAATGATCTAGCCCTAAAGCTTaatcaaaaccaagaaataATTTCACAAGCTTCAACTGATTATGGCCATATTATTCAAGAAAGCCCTATTGCTGTTTTGCAACCATCATCAATTAGTGATATTGCTAACTTGATAAATTATTCAAACTCTCTTACTAACCCTTTTACCATATCTGCTAGAGGAAAAGCCCATTCTGTTCTTGGTCAAGCCATGGCACGAAATGGGATTGTTGTGAATATGACTAATCTTAATGGGTTTAGAAAAAGGTCTGGAATTGTAGTGTCTGATGGAAAAAGCCCATTGGGCTGTTATGTTGATGTGGGCGGCGAACAATTGTGGATTGATGTTGTGCATGCGACTCTTAAGCGTGGACTCACGCCTCTCTCTTTGACTGATTACTTGTATCTGACGGTTGGTGGTACTCTCTCTAATGCTGGGATTGGTGGCCAATCCTTTCGATTTGGGCCTCTAGTCTCCAACGTTCTTGAATTGGATGTTGTTACCGGTACGATAGGTGAACTTGTGACTTGTTCATCAAGCATTAACTCAGATATATTTTATGCCGTTCTTGGAGGTCTAGGTCAATTTGGAGTGATAACGAGAGCAAGAATACCTCTAAGACCCGCACCAACAAGGGTGAAGTGGTTGCAGCTAATTTACAATGACTTTTCTGCATTTTCAAAAGATCAAGAATATTTAATCTCATTTGATAAAAGAAATGACACCAATGGAGCAGATTATGTTGAAGGCATACTTCTATTAAACAAGCCACTATTGGATCTTTCCTTTTATCCTCCTTTTGATCAACCAAGGATAGCATCTCTAGTAACTCAATATGGTATCATCTATGTCCTAGAGATTGCCAAATATTATGATACAAATTCTCAAGCACATATCAATCAGGAAGTCGATACTTTGGTGAAAGGGTTAAAGTTTGTTCCTACATTTATGTTCGAAAAAGATGTGACATACGAAGAATTTCTTAATAGAGTTCTTGCAGAGGAGTTATCTCTTAGATCTAAAGGGCTGTGGGATGCTCCTCATCCTTGGTTGAACATATTTATACCAAAATCAAGAATCTCAGATTTTAATGAAGGTGTTTTAAAGGGCATTATTCTAAAGCAAAATACTTCTGCAGGATCGGTTCTAGTCTACCCTATGAACCGAAACAAGTGGAATGATAAAATGTCAACAATTACACCAGACGAAGATGTATTCTACGTTGTAGATATTTTGAATGTTGCAAGTGTGTTAGATGAGTTGAAGACAATTCAAGCTCAAAATCATCAAATATTACAGTTTTGTAATGATTCTGGTATTAAGATGAAAGAATATCTTACGGGAAACAAAACACATCAAGAATGGGTTGAACACTTTGGACCTAAATGGCAACTTTTTGaagatagtaaaaataaatttgatccCAAAAGAATATTGTCACCTGGACAATTAATATTTCAGTAG 1548 0.3618 MATSAMISTLMAMLCLSITHGLNEIPIPNDLALKLNQNQEIISQASTDYGHIIQESPIAVLQPSSISDIANLINYSNSLTNPFTISARGKAHSVLGQAMARNGIVVNMTNLNGFRKRSGIVVSDGKSPLGCYVDVGGEQLWIDVVHATLKRGLTPLSLTDYLYLTVGGTLSNAGIGGQSFRFGPLVSNVLELDVVTGTIGELVTCSSSINSDIFYAVLGGLGQFGVITRARIPLRPAPTRVKWLQLIYNDFSAFSKDQEYLISFDKRNDTNGADYVEGILLLNKPLLDLSFYPPFDQPRIASLVTQYGIIYVLEIAKYYDTNSQAHINQEVDTLVKGLKFVPTFMFEKDVTYEEFLNRVLAEELSLRSKGLWDAPHPWLNIFIPKSRISDFNEGVLKGIILKQNTSAGSVLVYPMNRNKWNDKMSTITPDEDVFYVVDILNVASVLDELKTIQAQNHQILQFCNDSGIKMKEYLTGNKTHQEWVEHFGPKWQLFEDSKNKFDPKRILSPGQLIFQ 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02652 515 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 238 514 IPR015345 GO:0009690|GO:0019139|GO:0050660
Tsu08g02652 515 SUPERFAMILY FAD-binding/transporter-associated domain-like 37 236 IPR036318 GO:0050660
Tsu08g02652 515 Gene3D - 240 473 IPR016170 -
Tsu08g02652 515 ProSiteProfiles PCMH-type FAD-binding domain profile. 53 237 IPR016166 GO:0071949
Tsu08g02652 515 Pfam FAD binding domain 57 206 IPR006094 GO:0050660
Tsu08g02652 515 Gene3D - 40 514 IPR016167 -
Tsu08g02652 515 SUPERFAMILY FAD-linked oxidases, C-terminal domain 238 514 IPR016164 GO:0003824|GO:0050660
Tsu08g02652 515 PANTHER GULONOLACTONE OXIDASE 11 515 - -
Tsu08g02652 515 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 11 515 - -
Tsu08g02652 515 Gene3D - 108 239 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02652 Tsu-Chr8 40110925 40116045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02652 K00279 - gmx:100793158 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04529 04 52965639 52971155 Tsu08g02652 08 40110925 40116045 PCT