Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04529 ATGGCAAAGTGTTTTatactttcaaaaaccttgATTATTCTACTATGTCTAAATAGTATAGTGCACCCAATTGAAGCACTATTACAACCATGGTCATTACTAGATGCACCAAAAGAAATCCTACAAAACCTTATTCGTGATCCCTTGAGCCTTTCACTAGCCTCAACCGATTTTGGTCACATAATTCATCAAAACCCAGTTGCAATTTTTGCACCATCTTCTACAAATGACATATCGAAATTGATAAAATTCTCAAATTCACTTCCTATCCCTTTTACAATAGCTGCAAGAGGTCAAGGACATTCCGTTAATGGACAATCCATGACAAATGATGGTGTTGTGGTGAACATGACTGAATTGAATAAAAGGTTTGGAAATAATGAGAGTAGTGGAATTGTAGTGTTTGATAATTATGTAGATGTTGGTGGTGAACAAATTTGGATTGATGTTTTACATGCAACCCTTGAAAAAGGACTTACACCGCTCTCTTGGACTGATTACTTGTATTTATCGGTTGGTGGTACTCTCTCTAATGCCGGTATTAGTGGACAAACCTTTCGATTTGGTCCTCAAATTTCCAATGTCCTTGAATTAGATGTTGTTACAGGGGAAGGAAATTTTGTGACTTGTTCGACGAAGAAGAACTCAGAATTATTTAATGGTGTTCTAGGAGGTTTAGGCCAATTTGGGATTATAACCCGGGCAAGAATAGCTGTAGGGCCAGCACCCAAGAGGGTAAAGTGGCTCCGTTTATTTTACAACGACTTCTCTACATTTTCTGAAGACCAAGAGCATCTAATCTCACTCAATGGAATAAATGAAACTAATGCAGCAAATTATGTAGAAGGCATGTTGCTGCTAAATCAGCCACCACTAGACCTATCCTTTTATCCAGACATTGATCAACCTCGCATAACTTCCCTAGTAACACAATTTGGCATCATCTACATCATTGAGCTTGTTAAATATTACGATGATAACTCTAAAGATCATATTGATCAGgaaattgaaaatttggttCGAGGGTTAAAGTTTATTCCTACTTTTATGTTCGAAAAAGATACATCCTACGAAGAATTTCTAAATAGAGTTCATTTTGATGAGCTTGCACTAAGGACACAAGGACTTTGGGACATCCCTCACCCTtggttaaatatttttgttccaGGATCTAGAATTTCTGATTTTGATGAAGGTGTGTTCAAGGGTATTATCCTTAAACAAAATATCACTGCAGGACTTGTAATAGTCTATCCAATGAACCGAACAAAGTGGGATAATAACATGTCAGCAGTTACACCTAATGAAGAAATTTTCTACATTGTGAGTCTTTTGCGTACAACTGGATTTGATAAGTTGGAAGCATTTCAAGCTCAAAACCAACAAATATTACAATTTTGTAAGGATGCTCGTATAGGAAGCAAACAATATCTTCCCCTAAACAAAACACGTGAAGAATGGGTGGAACAATTTGGCCTCAAATGGAAAACTTTTGAGAAAAGAAAAGCTCAATTTGATCCCAATAAAATATTGTCACCTGGGCAAagaattttcaattaa 1560 0.3526 MAKCFILSKTLIILLCLNSIVHPIEALLQPWSLLDAPKEILQNLIRDPLSLSLASTDFGHIIHQNPVAIFAPSSTNDISKLIKFSNSLPIPFTIAARGQGHSVNGQSMTNDGVVVNMTELNKRFGNNESSGIVVFDNYVDVGGEQIWIDVLHATLEKGLTPLSWTDYLYLSVGGTLSNAGISGQTFRFGPQISNVLELDVVTGEGNFVTCSTKKNSELFNGVLGGLGQFGIITRARIAVGPAPKRVKWLRLFYNDFSTFSEDQEHLISLNGINETNAANYVEGMLLLNQPPLDLSFYPDIDQPRITSLVTQFGIIYIIELVKYYDDNSKDHIDQEIENLVRGLKFIPTFMFEKDTSYEEFLNRVHFDELALRTQGLWDIPHPWLNIFVPGSRISDFDEGVFKGIILKQNITAGLVIVYPMNRTKWDNNMSAVTPNEEIFYIVSLLRTTGFDKLEAFQAQNQQILQFCKDARIGSKQYLPLNKTREEWVEQFGLKWKTFEKRKAQFDPNKILSPGQRIFN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04529 519 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 243 518 IPR015345 GO:0009690|GO:0019139|GO:0050660
Tsu04g04529 519 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 9 519 - -
Tsu04g04529 519 PANTHER GULONOLACTONE OXIDASE 9 519 - -
Tsu04g04529 519 SUPERFAMILY FAD-linked oxidases, C-terminal domain 243 519 IPR016164 GO:0003824|GO:0050660
Tsu04g04529 519 ProSiteProfiles PCMH-type FAD-binding domain profile. 62 242 IPR016166 GO:0071949
Tsu04g04529 519 Gene3D - 49 518 IPR016167 -
Tsu04g04529 519 Pfam FAD binding domain 67 211 IPR006094 GO:0050660
Tsu04g04529 519 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 66 101 IPR006093 GO:0016491
Tsu04g04529 519 Gene3D - 245 477 IPR016170 -
Tsu04g04529 519 Gene3D - 117 244 IPR016169 -
Tsu04g04529 519 SUPERFAMILY FAD-binding/transporter-associated domain-like 43 241 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04529 Tsu-Chr4 52965639 52971155 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04529 K00279 - gmx:100808553 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04529 04 52965639 52971155 Tsu08g02652 08 40110925 40116045 PCT