Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02471 aTGGTGCAAACTAAGGATGGAACTGTTGCAGTAGCTTCTGCTTTTGGTGGCCATAAGAAAGCTATAAAGGATAGAGACCACAAATTTTTACGAAAAGCAGTTGAAGAAGCATATAAAGGTGTAGATTGTGAAGATGGAGGTCCTTTTGGTGCTGTTATTGTTTATAATGATGAAATTGTTGCTAGTTGCCACAACATGGTTCTTAGGAACAATGACCCTACTGCTCATGCTGAAGTCACAGCAATAAGAGAGGCTTGTAAGAAACTGAAGCAGATAGAACTTTCAGATTGTGAAATATATGCTTCTTGTGAACCATGCCCAATGTGCTTTGGTGCTATTCACCTTTCACGAGTTAAGaGGTTGGTTTATGGAGCAAAAGCTGAAGCTGCAATTGCGAtaggttttgatgattttaTAGCTGATGCATTGCGAGGAACTGGAGTTTATCAGAAAGCACAGTTGGAAATTAAAAGAGCTGATGGTAATGAAGCAATCATTGCTGAAGAAGTGTTtgaaaaaacaaaggaaaaatttcgaatgtattaa 546 0.359 MVQTKDGTVAVASAFGGHKKAIKDRDHKFLRKAVEEAYKGVDCEDGGPFGAVIVYNDEIVASCHNMVLRNNDPTAHAEVTAIREACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGFDDFIADALRGTGVYQKAQLEIKRADGNEAIIAEEVFEKTKEKFRMY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02471 181 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 2 180 - -
Tsu08g02471 181 CDD nucleoside_deaminase 30 137 - -
Tsu08g02471 181 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 2 180 - -
Tsu08g02471 181 SUPERFAMILY Cytidine deaminase-like 21 139 IPR016193 GO:0003824
Tsu08g02471 181 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 25 124 IPR002125 -
Tsu08g02471 181 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 24 138 IPR002125 -
Tsu08g02471 181 Gene3D Cytidine Deaminase, domain 2 17 180 - -
Tsu08g02471 181 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 76 113 IPR016192 GO:0008270|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02471 Tsu-Chr8 36726696 36730406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02471 - - gmx:100500436 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04403 04 51887348 51890781 Tsu08g02471 08 36726696 36730406 PCT