Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04403 ATGGAAGAAGTTAACGTTGTAGAAACTAAGGATGGAACCGTTTCAGTAGCTGCTGCATTTGCTGGTCACCAAGAAGCTGTGCAAGATAGAGACCACAAATTTTTAAGAAGAGCAGTTGAAGAAGCATATAAAGGAGTAGATTGTGGAGATGGAGGCCCTTTTGGTGCTGTTATTGTTCACAAGGATGAAGTAGTTGCTAGTTGTCACAACATGGTTCTGAATTACACTGATCCAACTGCTCATGCAGAGGTCACAGCAATAAGAGAGGCTTGTAAGAAGCTGAAGCAGATAGAACTTTCAGATTGTGAAATATATGCTTCTTGTGAACCTTGCCCCATGTGCTTTGGGGCAATCCACCTTTCCCGAATTAAGAGATTGGTTTATGGAGCTAAGGCAGAGGCAGCAATTGCTATTGGGTTTGATGATTTTATTGCAGATGCATTGAGAGGTACTGGATTCTATCAGAAAGCATCGTTGGAAATTAAAAGAGCTGACGGTAATGAGGCCATCATTgcagaagaggtttttgagaaaacaaagGCAAAATTCCAAATGtattaa 561 0.3904 MEEVNVVETKDGTVSVAAAFAGHQEAVQDRDHKFLRRAVEEAYKGVDCGDGGPFGAVIVHKDEVVASCHNMVLNYTDPTAHAEVTAIREACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKASLEIKRADGNEAIIAEEVFEKTKAKFQMY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04403 186 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 30 129 IPR002125 -
Tsu04g04403 186 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 81 118 IPR016192 GO:0008270|GO:0016787
Tsu04g04403 186 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1 185 - -
Tsu04g04403 186 CDD nucleoside_deaminase 35 142 - -
Tsu04g04403 186 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 143 IPR002125 -
Tsu04g04403 186 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 185 - -
Tsu04g04403 186 Gene3D Cytidine Deaminase, domain 2 30 185 - -
Tsu04g04403 186 SUPERFAMILY Cytidine deaminase-like 24 144 IPR016193 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04403 Tsu-Chr4 51887348 51890781 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04403 - - cam:101506670 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04403 04 51887348 51890781 Tsu08g02471 08 36726696 36730406 PCT