Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02281 ATGTCTCCACCAACCAAAACCACACCAAAACCCTCAAAATCCAACAACATTCATCACGTCACTCCCACTCAAACTACCGAATCACCTTCCCTTTCCCCTTCCGTTCCGCCGCGGCGACGTAGTCTCCGTCTCGCTTCTATTTCTAACTCCGAACCTCCGAAATCTCCAACCGTAACTACCCCCGAACCACCAACCGCTAGGGTTTCCGAaccaaaaatgaagaaatttaaCCTAACCGCTTCCGAACCAAAAATGAACAAATCGAACTTAACCGCTTCTGAATCCGAACCTATTCTTAACTTGCGATCAGGAAAGAAAATTCTCAAACGCGGAATCATTATCGCAAATGATCATGAAGATTCTGAAAATAATGATTCTAAAAGGAACAAAAACGAAGAAAATCGAAGTGAAGTGAAGATTGATGAAGGTGAATCGAGTGGAAGGAGAATATTAACTagagaagagaaaggaaaggaaaaagaaaatcaaattgaaaaggAAACCGTCGTTGATGATGACAAAATAGTTGAATTTGGGGTGGAATTGGAAATTGGGAACAATATGGAAGAGGAGAATGAAGAATTGAATGTTGAAGAACAAGTTAGAAATGCTGGTGTTGAATTCAATGTGGATTTGGAAATGGAGAACAATGTGGAAGAGATGAATGAAGAATTGAATGTTGTAGAACAAGTTAGAAATGTTAACAATAATGAGCGTGGTGTGAGGAGGAACCTGGAAGCATTCCGTCGTATAGCGAGAGAAAATGCAACTCGTTTCGCCCGTTTTGCTGATGACGAAAACGATGGTGGTGATTTGTCACCTGAAAATGAACAGGAGAAGAATGAGATTGAAGATTGGCCTGGTCCTTTTTCAACTGCTATGAAAATTATCAAGGATCGTGAAAAGAAAGGGATTGAATTTAGTTATGTGGCTTTGCAAAAgaatttggttgatttgatAAAGTGGAAACCGAAATCGAAAGAGGAAAAGTTAGGTGGGAAGTTAACGGTTCCGTCTTTGCAAGAACTTTGCATTCGGATACTTGCTAAAAATGTTGATGCGATTGTTTCGCTTGAGGGTGTGCCTGATGCTTTGAGGCATAGGCTTACTCAGTTGCTGTGTGATTCGAGAAGAATGAACGATCATTTCTTTGAACTTCTTGTTAGTGGAACTCCTACGGAGATTCGGGTTAGAGATTGCTCGTGGTTGTCTGAGGAACAATTTACCAAGTGCTTTCTAGCAAGTGATACTTCTAAACTGGTGGTACTGCAACTTGATCAGTGTGGGCGTTGTTTGCCAGATTATGTGGTGGATTCTACTTTGGCAAGGCCACCAAAGCAGTTACCTGTGTTAACTAGTATATCCCTTGGTGGTGCATGCCGGCTCTCAGATGGGGGGTTGCGTTCACTTGTTTCTTCTACTCCAATGCTTAGATCAATAAATCTTAGCCAGTGCTCCCTTCTAACATCTGCTAGTCTTTATATGTTGGCTGAATCATTAAAATCTCTTCTGAAAGAGTTGTACCTTGATCATTGCCTCGGCATTGATGCTGCACTAATTGTGCCAGCGCTGATGGAGTTTGAGCATTTAGAAGTATTGTCAGTGGCTGGCATCCCAACTGTTTGCGATGCATTTATCAAGGATTACATTGTTGCACGTGGTCACAACATGAAAGAGCTTATTCTCAAGGACTGCATAAACTTGACTGATGCATCAATCAAAGTCATCGCTGAACACTGTCCTGGAATATGTGGGCTTGATCTTTCGAGCGTGTGCAAATTAACAGATATGTCCATGGGATATCTTACAAATGGTTGTCATGCACTTCATACACTGAAGCTTTGCCGTAACCCATTCAGTGATGAAGCAGTTGCTGCGTATGTGGAGACTAATGGAGAGTCCTTGATAGAACTATGGCTTAATAACGTTAAAAAGGTTGGTTACCACACAACATTATCACTTgcaagaaatggaaaaaaattgcATAGTCTAGATCTATCTTGGTGCCGAAATTTGACCGACAATGCATTGGGTTTGATAGTGGATAGTTGCCTGTCGCTGAGATTACTTAAACTCTTTGGATGCACTCAGGTAACGGATGTTTTTCTGAATGGCCACTCAAACTCGCAGATCCAGTTAATTGGTATAAAAATGACTTCTGTTTTACAACATGTGAAAGTGCCGGATCCTAATCGAAGTACTTTGAATTATTCATCGGTCTCAGTAGAGCTGGCTCCATAG 2241 0.3985 MSPPTKTTPKPSKSNNIHHVTPTQTTESPSLSPSVPPRRRSLRLASISNSEPPKSPTVTTPEPPTARVSEPKMKKFNLTASEPKMNKSNLTASESEPILNLRSGKKILKRGIIIANDHEDSENNDSKRNKNEENRSEVKIDEGESSGRRILTREEKGKEKENQIEKETVVDDDKIVEFGVELEIGNNMEEENEELNVEEQVRNAGVEFNVDLEMENNVEEMNEELNVVEQVRNVNNNERGVRRNLEAFRRIARENATRFARFADDENDGGDLSPENEQEKNEIEDWPGPFSTAMKIIKDREKKGIEFSYVALQKNLVDLIKWKPKSKEEKLGGKLTVPSLQELCIRILAKNVDAIVSLEGVPDALRHRLTQLLCDSRRMNDHFFELLVSGTPTEIRVRDCSWLSEEQFTKCFLASDTSKLVVLQLDQCGRCLPDYVVDSTLARPPKQLPVLTSISLGGACRLSDGGLRSLVSSTPMLRSINLSQCSLLTSASLYMLAESLKSLLKELYLDHCLGIDAALIVPALMEFEHLEVLSVAGIPTVCDAFIKDYIVARGHNMKELILKDCINLTDASIKVIAEHCPGICGLDLSSVCKLTDMSMGYLTNGCHALHTLKLCRNPFSDEAVAAYVETNGESLIELWLNNVKKVGYHTTLSLARNGKKLHSLDLSWCRNLTDNALGLIVDSCLSLRLLKLFGCTQVTDVFLNGHSNSQIQLIGIKMTSVLQHVKVPDPNRSTLNYSSVSVELAP 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02281 746 PANTHER UNCHARACTERIZED 189 739 - -
Tsu08g02281 746 Gene3D Ribonuclease Inhibitor 546 648 IPR032675 -
Tsu08g02281 746 Gene3D Ribonuclease Inhibitor 649 741 IPR032675 -
Tsu08g02281 746 MobiDBLite consensus disorder prediction 264 284 - -
Tsu08g02281 746 PANTHER F-BOX/LRR PROTEIN 189 739 - -
Tsu08g02281 746 MobiDBLite consensus disorder prediction 81 98 - -
Tsu08g02281 746 MobiDBLite consensus disorder prediction 7 35 - -
Tsu08g02281 746 Gene3D Ribonuclease Inhibitor 344 545 IPR032675 -
Tsu08g02281 746 MobiDBLite consensus disorder prediction 116 163 - -
Tsu08g02281 746 SUPERFAMILY RNI-like 411 707 - -
Tsu08g02281 746 Coils Coil 211 238 - -
Tsu08g02281 746 MobiDBLite consensus disorder prediction 264 285 - -
Tsu08g02281 746 SMART LRR_CC_2 554 579 IPR006553 -
Tsu08g02281 746 SMART LRR_CC_2 606 630 IPR006553 -
Tsu08g02281 746 SMART LRR_CC_2 658 683 IPR006553 -
Tsu08g02281 746 SMART LRR_CC_2 684 709 IPR006553 -
Tsu08g02281 746 SMART LRR_CC_2 448 473 IPR006553 -
Tsu08g02281 746 SMART LRR_CC_2 580 605 IPR006553 -
Tsu08g02281 746 SMART LRR_CC_2 474 499 IPR006553 -
Tsu08g02281 746 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02281 Tsu-Chr8 31811702 31817782 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02281 K15082 - gmx:100808150 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04484 04 52580180 52583514 Tsu08g02281 08 31811702 31817782 PCT