Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02262 ATGGCTGGAGTTACAAAGGAGGAAGATTCGGGTTCGAGTAGTCCTAGTTGGGGTGCTGCTTCGTTTTTTATGCAGACAACTGAAGATGTGGCTAAAGCTGTTGCTGCTGCGATGAATGCTCAAAGGCCGTCTGTTATATATTCATCCAAAAATGAACAGGGTGGTGGTAGTCAGCTTCAAAGGTTGCAGTATCAAGTTACGAAAATGATTAAAGGATTTTCTCGCCCTCCTGAAGTTAAATATGCAAATTACAATCCGGAAATCTTGACTAGTCAGAAGCGTCAATGGGCTGCGAACTTTCATTTGCAGTACAATGATCATAAGTCTTGGAAGGAGCCAACAAGGTTGTTTGAAAGTATGGTGATTGTTGGACTTCATCCTAACTGCGACATGGAGGCACTGCATAGCCAATTTTTAGATAAAAAGTCTGAAGACTATGACTTTGATAGTGAGCAATTCAGAAGTGTACTTGGTCATCAGAATCAATCACGTGTGGAGCTTAATGTTGAACCTCAGGTCTTGTTCATTTACCCTCCAGAAAAGCAGCTACCTCTTAAAGAAAAggatcttctttctttctgtttcCCTGGCGGTCTTGAGGTTAATGCTGTTGAGAAAACCCCTTCAATGAGTGAATTGAATGAAATTCATTTTGGGCAGGAACACCTTAAACAAAGAGATCTGTCTTTTGTATTTAGGTTACAGGGTGCTGAGAATTCAACACTTTATGGGTGTTGTGTCTTAGTTGAAGAGCTAGTGCATAAACCCTCTGGATTGATTTCTATGGTTATGGATAAGCGGTTATCTACCTCTTCATTGAGACGCCATGTATTAACCACACAAAGATGTTACTGTATTCTCTCAAGGCTTCCATTTTTTGAGTTGCACTTTGGTGCATTGAACagCATCTTCATGCAAGAAAGGCTAGAGCGGTTGTCAAGAAGTGTTGAATATTTGGATTTAGAAAGTGTTGAAGGGAGTTATGAGGAAGACAAACTTGATGAGAATTCAAGAATTTCTCAATCAAACCTAAGAAATTCCATACCCAATAACATTGAAGGTGAGAGTAATCATCTAGAGAAACAAATTCTCAATGAGGAGCTGCTTACACTTAAGGAGGGAgcagatgatgatgatagtgtGCCTATTCATCCTGAAACCGATAGAAAAAATTCCAAACAAGAATCTGGCCCTACAGTTGCTGAAGACAGTAATATGTATGGCGATGCTTTGGTAACAAACAAACAGTCAGAAGATAGGCGCATACCAACTTCTATTTTCCCCGTCCTGCGAAATTGCCAATACGAAAGCTCCGAGTCTTCAAGCAGTTTTCAAGGATCACCTTGTGAAGATAGAAATTTTAGGAGTGATGCTGATGATACTGAGACAGAAGAGGCTTCATTCTCGGGACAAGAGGATATAACTGACCTACATGAGATTCTTGCATGGGCCAAGGCAAACAATTGTGGACCATTACAAATTATTAGTGAGTATTATCGTTTTAGTTGCCCTACAAGGGGATCAACACTTAACTTTCAACCTTTGGAGCACCTTCATCCTTTGGAATATCACAGGCTAGATGAGAATGCTCTTTATCTCTCTGGTTCGACTGTTGATTTTAAATCCTGTAATACGGGTCTGGAATTAGCTGAGGCACAAAACTCACTTCTGGTTGCAGAGGAGGCAACCGCATTATCTACATGGGCTATAGCGTGCTTATGTGGTACCTTAAGACTAGAACATGTGTTGACATTCTTTGCAGGAGCTCTACTGGAGAAACAGATAGTATTTGTCTGTTCTAATTTGGGAATTCTATCTGCATCAGTTTTATCAGTTATTCCCCTAATCCGACCCTACCAATGGCAAAGCCTGCTAATGCCAGTTTTACCAAATGAAATGCTTGACTTTCTGGATGCTCCTGTCCCTTACATAGTTGGTGTGAGGAACAAGACAAGTGAAGTTCAGTCAAAGTTAACAAATGTTATTCTGGTTGATACCAACAAAAACCAGGTGAAGTCACCATCACTACCTCAACTGCCAAGACAGAAAGAGCTAATGTCTTCTTTACGTCCTTATCATACAACTCTTGTCGGAGAAAGTTACTTGGGTAGAAGAAGGCCGGTGTACGAATGCACTGCAATGCAGGTAGAAGCTGCCAAGGAATTCTTATCAATATTAAGGTCTTATTTGGATTCCCTTTGCCAAAACATCCGTTCACATACAATAACCAATGTACAATCCAATGACGATAAGGTATCCTTGCTTTTGAGGGAGAGTTTCATCGACTCATTTCCTTATCGTGATCAGCCTTTTATGAAGCTTTTTGTGGATACACAACTCTTCTCGGTACACACAGATCTTGTTCTCTCGTATTTCCAAAAGGAATAG 2388 0.3978 MAGVTKEEDSGSSSPSWGAASFFMQTTEDVAKAVAAAMNAQRPSVIYSSKNEQGGGSQLQRLQYQVTKMIKGFSRPPEVKYANYNPEILTSQKRQWAANFHLQYNDHKSWKEPTRLFESMVIVGLHPNCDMEALHSQFLDKKSEDYDFDSEQFRSVLGHQNQSRVELNVEPQVLFIYPPEKQLPLKEKDLLSFCFPGGLEVNAVEKTPSMSELNEIHFGQEHLKQRDLSFVFRLQGAENSTLYGCCVLVEELVHKPSGLISMVMDKRLSTSSLRRHVLTTQRCYCILSRLPFFELHFGALNSIFMQERLERLSRSVEYLDLESVEGSYEEDKLDENSRISQSNLRNSIPNNIEGESNHLEKQILNEELLTLKEGADDDDSVPIHPETDRKNSKQESGPTVAEDSNMYGDALVTNKQSEDRRIPTSIFPVLRNCQYESSESSSSFQGSPCEDRNFRSDADDTETEEASFSGQEDITDLHEILAWAKANNCGPLQIISEYYRFSCPTRGSTLNFQPLEHLHPLEYHRLDENALYLSGSTVDFKSCNTGLELAEAQNSLLVAEEATALSTWAIACLCGTLRLEHVLTFFAGALLEKQIVFVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNEMLDFLDAPVPYIVGVRNKTSEVQSKLTNVILVDTNKNQVKSPSLPQLPRQKELMSSLRPYHTTLVGESYLGRRRPVYECTAMQVEAAKEFLSILRSYLDSLCQNIRSHTITNVQSNDDKVSLLLRESFIDSFPYRDQPFMKLFVDTQLFSVHTDLVLSYFQKE 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02262 795 MobiDBLite consensus disorder prediction 373 396 - -
Tsu08g02262 795 SMART DENN_cls 279 669 IPR001194 -
Tsu08g02262 795 MobiDBLite consensus disorder prediction 373 418 - -
Tsu08g02262 795 MobiDBLite consensus disorder prediction 438 471 - -
Tsu08g02262 795 Gene3D - 106 319 - -
Tsu08g02262 795 ProSiteProfiles Tripartite DENN domain profile. 151 795 IPR037516 -
Tsu08g02262 795 Pfam uDENN domain 171 248 IPR005113 -
Tsu08g02262 795 MobiDBLite consensus disorder prediction 339 353 - -
Tsu08g02262 795 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 795 - -
Tsu08g02262 795 Coils Coil 792 795 - -
Tsu08g02262 795 Pfam DENN (AEX-3) domain 520 668 IPR001194 -
Tsu08g02262 795 Gene3D - 563 735 IPR043153 -
Tsu08g02262 795 MobiDBLite consensus disorder prediction 330 353 - -
Tsu08g02262 795 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 795 - -
Tsu08g02262 795 SMART uDENN_cls 113 250 IPR005113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02262 Tsu-Chr8 31270799 31283790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02262 - - gmx:100782148 1219.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04487 04 52607082 52618339 Tsu08g02262 08 31270799 31283790 PCT