Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02253 ATgtcatctacttctacatcccAAGGAGTAGAGCACATCGTACTCTTGAAAGTCAAAGACAACATAGAATCATCAAAAATCAACACCATGATCAATGAAGTTCAATCCTTAGTTACAATTGAACAAGTTCGCCACTTCATTGTGGGCCCACTTCTAACCAACAACAAAACCACCTCAACGACCATACCCTTTTCGGATCTTAGTTACACTCACTTGGTACATAGTCGTTATGAGTCAAAGGAAGACCTTCAAATTTACAACGATCACCCTAACCACATCAACGTCGTAAGAGGCTTCGTTTTCCCTATCTGTGACGACCTTCTGGTCATCGATTGGATAGGTGAAGATGTTGCTCTTTTGTCTCACCCTTTGCCCGGTATTGCTTTTCGTTTGAGTTTATTAAAACTTAAGGACGAAAAGGACACTAAAGTTAAAGAGGAGGTTTTTCGGGCTCTTCGAGGTATTGAGGAGAATGTTGGAGGAGTTAGTTATGTATCTTATGGAGAAAATATCTCGCCAGAGAGGGCAAAGGGTTTCTCCATTGCTTCGCTTGTTATTTTTTCAAGACGGGAGGGGTTGGACCGTGTGGAGCCAGAGGAGGGTTTGGTTAAGGTTAAGGGGTATTTGGAAAGTGTGGTGGTGGTTGATTTTGTGGTTCCTTCGAAGTAG 669 0.4111 MSSTSTSQGVEHIVLLKVKDNIESSKINTMINEVQSLVTIEQVRHFIVGPLLTNNKTTSTTIPFSDLSYTHLVHSRYESKEDLQIYNDHPNHINVVRGFVFPICDDLLVIDWIGEDVALLSHPLPGIAFRLSLLKLKDEKDTKVKEEVFRALRGIEENVGGVSYVSYGENISPERAKGFSIASLVIFSRREGLDRVEPEEGLVKVKGYLESVVVVDFVVPSK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02253 222 ProSiteProfiles Stress-response A/B barrel domain profile. 128 221 IPR013097 -
Tsu08g02253 222 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3 2 220 - -
Tsu08g02253 222 SMART Dabb_2 10 114 IPR013097 -
Tsu08g02253 222 SMART Dabb_2 128 219 IPR013097 -
Tsu08g02253 222 SUPERFAMILY Dimeric alpha+beta barrel 8 113 IPR011008 -
Tsu08g02253 222 SUPERFAMILY Dimeric alpha+beta barrel 132 219 IPR011008 -
Tsu08g02253 222 PANTHER - 2 220 IPR044662 -
Tsu08g02253 222 ProSiteProfiles Stress-response A/B barrel domain profile. 10 112 IPR013097 -
Tsu08g02253 222 Gene3D - 129 219 - -
Tsu08g02253 222 Gene3D - 9 112 - -
Tsu08g02253 222 Pfam Stress responsive A/B Barrel Domain 10 112 IPR013097 -
Tsu08g02253 222 Pfam Stress responsive A/B Barrel Domain 130 219 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02253 Tsu-Chr8 31055807 31056475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02253 - - lja:Lj6g3v1201360.1 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04492 04 52651855 52653487 Tsu08g02253 08 31055807 31056475 PCT