Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02250 ATGGCTTCCACTTCTGCAGTATCAATGGCAATGTCACTAACTTACTCCAGCAAGAAGAGGGTGGTTAATAGTTCAGAGGCATTCTTCAATCCACTGCCTGTTCGGTATATAAAGGCTGTCGCGTCGTCAAAATGCAATGGAAGATTTCAAGTCAGGGCCTCCATGAAGGAGAAAGTTGTGACGGGGCTCACAGCAGCTGCATTGACAGCTTCAATGGTGGTTCCTGATGTGGCTGAAGCTGCCGTTTCACCTTCTCTCAAGAATTTCTTACTCAGCATCGCGGCTGGTGGAGTTGTGGTTGTAGTCATCCTTGGTGCTGTGATTGCTGTATCCAATTTCGATCCCGTCAAGCGAAACCGATGA 363 0.4793 MASTSAVSMAMSLTYSSKKRVVNSSEAFFNPLPVRYIKAVASSKCNGRFQVRASMKEKVVTGLTAAALTASMVVPDVAEAAVSPSLKNFLLSIAAGGVVVVVILGAVIAVSNFDPVKRNR 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02250 120 Gene3D Single helix bin 81 119 - -
Tsu08g02250 120 PANTHER OS07G0673550 PROTEIN 1 118 - -
Tsu08g02250 120 PANTHER EXPRESSED PROTEIN 1 118 - -
Tsu08g02250 120 Hamap Photosystem II reaction center X protein [psbX]. 82 120 IPR023431 -
Tsu08g02250 120 Pfam Photosystem II reaction centre X protein (PsbX) 82 118 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02250 Tsu-Chr8 30965296 30965658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02250 - - gmx:100306291 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04494 04 52668933 52670062 Tsu08g02250 08 30965296 30965658 PCT