Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu04g04494 | ATGGCTTCAACTTCCATAATTTCAATGTCTGTGCCAGTAACCTGTGCCTCTAGCAAGAAGATAGAGTCACCAACCTCTCAAGCATTCTTCAAAGCACCATTGACTCTGAAGCCATTATCAAAGTCCAACGGTGGAAGGTTTCAATTTCAAGTGAAAGCTTCTTTGAAAGAGAAAGTTGTAACAGGACTTACTGCAGCTGCATTAACAGCTTCAATGATTGTTCCTGATGTTGCTGAAGCTGCTACTGTTTCACCTTCTCTCAAGAATTTCTTGCTCAGTATTGTTTCTGgtggtgttgttgttgctgcCATTCTTGGTGCTGTTATTGCTGTTTCCAATTTCGACCCTGTCAAGCGAACCTGA | 363 | 0.3939 | MASTSIISMSVPVTCASSKKIESPTSQAFFKAPLTLKPLSKSNGGRFQFQVKASLKEKVVTGLTAAALTASMIVPDVAEAATVSPSLKNFLLSIVSGGVVVAAILGAVIAVSNFDPVKRT | 120 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu04g04494 | 120 | PANTHER | OS07G0673550 PROTEIN | 1 | 120 | - | - | |
| Tsu04g04494 | 120 | Pfam | Photosystem II reaction centre X protein (PsbX) | 83 | 119 | IPR009518 | GO:0009523|GO:0015979|GO:0016020 | |
| Tsu04g04494 | 120 | Gene3D | Single helix bin | 82 | 120 | - | - | |
| Tsu04g04494 | 120 | PANTHER | EXPRESSED PROTEIN | 1 | 120 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu04g04494 | Tsu-Chr4 | 52668933 | 52670062 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu04g04494 | - | - | rcu:8268448 | 125.176 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu04g04494 | 04 | 52668933 | 52670062 | Tsu04g04494 | 04 | 52668933 | 52670062 | ECH | |
| Tsu04g04494 | 04 | 52668933 | 52670062 | Tsu08g02250 | 08 | 30965296 | 30965658 | PCT |