Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02155 ATGCAGGACCTAAAcaacaagatttttttaaatgcaGTGAAAGCCTTTTCACCGTTGAAACTGAGATTAGGTGGAAGTTTGCAAGATAAGGTGATATATGGGACTGAAGATTACAACCAACCATGCACACCTTTTGTCCGAAAAGAATCCGAAATTTTTGGATTCACACAAGGGTGCCTCCCAATGGAAAGATGGGATGAACTTAATGCTTTCTTCCAAAAAGCAGGGGCAAAGATTGTCTTTGGATTGAATGCTCTTAATGGAAAGTCAATACAAGCTGGTGGTTCTGCAAATGGACCTTGGAACTACACGAATGCCGAATCGTTTATTCAATACACTGTTGGAAAGAACTATGACATTCATGGATGGGAACTTGGAAATGAATTGAGTGGGAATGGTGTTGGGACAAGTATTTCTGCAGACCAATATGCTTCTGATTTTGCTGCTTTAAGAGACATAGTTGACAATGCATATAGAGACATTGAGCCTAAGCCATTAGTCATTGCTCCTGGAGGTTTCTTTGATGCAACTTGGTTCAAGGAATTTATAAGCAAATCTGGTAAATCTTTAGATGTGGTCACGCACCACATTTATAACCTTGGACCAGGAGTTGATCAGCACCTTGTGGAGAAAATTCTGAATCCTTCATTTCTTGATGGAGAGAAAAGTACATTCAATGGCTTGAAAAATGTTCTTGAAAGTACAGGAACCTTGGCAACAGCATGGGTTGGTGAGTCAGGAGGGGCTTATAACAGTGGCCATCATCTTGTATCCGATGCATTTGTCTACAGTTTCTGGTATTTGGATCAACTTGGCATGTCTGCTGCTTATGACACGAAAACGTATTGTAGACAGAGTTTGATAGGAGGAAACTATGGTTTACTAAATACTACCAATTTCCTTCCAAATCCTGATTACTATAGTGCTCTTCTCTGGCACCGACTCATGGGACGACGTGTACTGTCAACTACCTTCTCAGGAACAAACAAGATACGAGCTTATGCACACTGTGCTAAGCAATCCAAAGGAATCACTATACTATTGATCAACCTGGACAACAACACAACTGTTGAAGCGACAATTAGCAACATTAACAGTTTGCGGCATAGAAAGATGTCCTATAAGTCAAAAATAATGAAACTGCCTCTTCATAGTACAAGTGAAACAACGAGAGAAGAGTACCATCTAACTCCACAAGATGGAAATTTACATAGCCAAGTCATGTTACTGAATGGAAATGTTTTAAGCGTAAACTCAGCTGGTGATATCCCTCGATTGGAGCCTCTATATGTAAACTCATCAAAACCAATAAGCGTTGCTCCTTTCTCCATTGTATTTTCTCATATACCTGATGCTGTTGTTCCAGCTTGCAGCTAG 1377 0.3965 MQDLNNKIFLNAVKAFSPLKLRLGGSLQDKVIYGTEDYNQPCTPFVRKESEIFGFTQGCLPMERWDELNAFFQKAGAKIVFGLNALNGKSIQAGGSANGPWNYTNAESFIQYTVGKNYDIHGWELGNELSGNGVGTSISADQYASDFAALRDIVDNAYRDIEPKPLVIAPGGFFDATWFKEFISKSGKSLDVVTHHIYNLGPGVDQHLVEKILNPSFLDGEKSTFNGLKNVLESTGTLATAWVGESGGAYNSGHHLVSDAFVYSFWYLDQLGMSAAYDTKTYCRQSLIGGNYGLLNTTNFLPNPDYYSALLWHRLMGRRVLSTTFSGTNKIRAYAHCAKQSKGITILLINLDNNTTVEATISNINSLRHRKMSYKSKIMKLPLHSTSETTREEYHLTPQDGNLHSQVMLLNGNVLSVNSAGDIPRLEPLYVNSSKPISVAPFSIVFSHIPDAVVPACS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02155 458 PANTHER HEPARANASE-RELATED 3 457 - -
Tsu08g02155 458 Pfam Glycosyl hydrolase family 79, N-terminal domain 3 272 IPR005199 GO:0016020|GO:0016798
Tsu08g02155 458 PANTHER HEPARANASE-LIKE PROTEIN 3 3 457 - -
Tsu08g02155 458 SUPERFAMILY (Trans)glycosidases 3 316 IPR017853 -
Tsu08g02155 458 Gene3D Glycosidases 1 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02155 Tsu-Chr8 29274222 29278511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02155 3 458 Glycoside Hydrolase AT5G61250 47.752 6.28e-161 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02155 K07964 - gmx:100802477 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04043 04 49065857 49069019 Tsu08g02155 08 29274222 29278511 PCT