Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01267 ATGGCTTCTTCGGAAGCCTATTCCCGTCTGAGTCAGCTCGTTGTCCCTGCACTCGACAAGATCATAAAAAACGCTTCGTGGCGAAAGCATGCGAAGCTCGCTCATGAGTGCAAATCCGTCATCGAGAGGCTCAGTCTCAGCAATCATCAGTTACCGCCTGATTCTCCTTCTGATACCGAACCGGAAACGCCCGGTCCGCTTCACGACGGCGGTCCGGTTGAGTACTCGCTCGCCGAGTCGGAGTCGATTCTCACTCCTCTCATCAATGCCGCTGGTTCCGGTGTCCTCAAGATCGCTGATCCTGCCGTTGACGCCATTCAGAAACTCATCGCACATGGATACCTCCGCGGCGAAGCAGATCCCTGCGGTACTTCCGGCGAGGCAAAGTTACTTTCAAACATGATCGAATCGGTTTGCAAATGCCACGATTTCGGTGATGAAGGGATGGAATTGCTGGTGCTGAAAACGCTCTTATCAGCGGTAACTTCGATTTCACTTCGAATTCATGGGGATTGTTTGCTTCAGATAGTTAGAACGTGTTACGATATATATCTTGTGAGTAAGAATATGGTGAATCAAACTACGGCAAAGGCGTCATTGATTCAAATGTTAGTGATTGTGTTTAGGAGAATGGAAGCAGATTCTTCCACGGTTCCGATTCAGCCAATTGTGGTGGCTGAATTGATGGCGCCCGTGGAACAATCTGATGTGGACAGTTCAATGACACTGTTTGTGCAAGGGTTTATTACAAAGATAATGCAGGACATTGATGGAGTTTTGAATCCAGTTACACCTAGTGGTAAGGTTTCATTGTTAGGAGGACATGATGGTGCGTTTGAAACCACCACGGTGGAGACGACAAATCCTACTGATTTGTTGGATTCTACTGATAAGGACATGTTAGATGCTAAGTATTGGGAGATCAGTATGTATAAGACCGCGTTGGAGGGTAGGAAAGGAGAGTTGGTTGACGGGGAGTTGGTGGAGAGGGATGATGATTTGGAAGTTCAGATTGGGAACAAATTGAGGAGGGAtgcttttttagtttttagggCGCTTTGTAAATTGTCGATGAAGACACCACCTAAGGAGGCATCTGCGGATCCAGAGTTGATGAAGGGGAAGATTGTGGCTTTAGAGTTATTGAAGATTTTGCTAGAGAATGCTGGAGCTGTCTTCAGGACTAGTGACAGGTTTTTAGGTGCCATCAAGCAGTACTTATGTTTATCATTATTGAAGAACAGTGCTTCAACTCTTTTGATTGTTTTTCAGCTGTCATGCTCCATTTTTATCAGTTTGGTATCAAGATTTAGGGCTGGATTGAAAGCAGAAATTGGAGTTTTTTTCCCTATGATTGTTCTTAGGGTCCTAGAAAATGTTTCTCAACCTAATTTTCAGCAGAAGATGATTGTGCTTCGATTTCTAAAGAAGCTTTGTGTTGATTCACAAATATTGGTTGACATTTTTATCAACTATGACTGTGATGTTAATTCATCAAACATATTTGAGAGGATGGTTAATGGACTTCTTAAAACTGCTCAAGGTGTTCCTCCTGGTGTTACAACCACACTTTTGCCACCTCAAGAACCAACACTAAAACTTGAAGCCATGAAATGCTTGGTTGATATTCTAAAATCGATGGGAGACTGGATGAACAAACAATTGCGAATTCCAGATCCTCATTCAGCCAAGAAAGTTGAAACGGCTGATAATAGCTATGACGCTGGAGGTTCTGCTATGGCAAATGGAAATGGAGTAGACCCAGTTGAAGGATCTGATTCTCATTCTGAAATCCCAAATGATACATCTGATGTTTCAACTATTGAGCAACGCCGGGCTTATAAATTGGAACTTCAGGAAGGTATAACACTTTTTAATAGGAAGCCTAAGAAAGGAATTGAGTTTCTCATCAATGCCAACAAGGTGGGTGATTCACCAGAAGATATAGCTACTTTTCTTAAAGATGCATCTGGGTTGGACAAAACTTTGATTGGTGATTATCTAGGTGAAAGAGAAGAATTATCCTTGAAGGTAATGCATGCCTATGTGGATTCCTTTAACTTTCAAGGGATGGAGTTTGATGAGGCAATCAGAGTCTTTCTTCAAGGATTTAGACTACCTGGTGAGGCACAAAAGATTGATCGGATAATGGAAAAGTTTGCTGAACGATATTGGAAATGTAATCCTACGGCTTTTTCCAGTGCTGACACAGCATATGTCCTTGCCTATTCTGTGATAATGCTCAATACAGATGCCCACAATCATATGGTGAAGGACAAGATGTCTGCTGATGATTTCATCAGAAACAATCGTGGCATTGATGATGGAAAAGATCTGCCTGAGGAATACCTGAAGTCCTTGTATGATAGAATATCTAGAAATGAgatcaaaatgaaagaaagtGATATGGCTGCCCAACAAAGGCAGGCTGTGAACCCAAATAAACTTTTAGGCTTGGATAGTATATTGAATATTGTGGTCCGTAAGCGTGATGAGAGTCAAATGGAAACCAGTGATGATCTTATCCGTCACATGCAAGAACAATTCAAAGAAAAAGCTCGCAAAACTGAGTCAGTTTATTATGCAGCGACAGATGCTGTAATTCTCAGATTCATGATAGAGGTGTGTTGGGCACCAATGTTAGCTGCTTTCAGTGTAGCTCTTGATCAAAGTGATGATGAGATTGTAATATGTCTCTGTCTTGAAGGCTTCCGCTATGCTATTCATGTTACTTCCGTAATGTCTATGAAGACTCATAGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACTTCTCTGCATTCTCCCGCAGATATTAAGCAAAAGAATATATATGCGATTAAGGAAATAATTACTATTGCTGATGAGGATGGGAATTACTTGCAAGAAGCTTGGGAGCATATCTTGACTTGTGTTTCCCGATTTGAGCATCTACATCTTCTTGGAGAGGGGGCTCCACCAGATGCtacctttttttcctttcctcaGAATGATTTGGAACAAACAAAGCAAGCTAAATCAACCATTCTTCCTGTTTTGAAGAAGAAGGGACATGGGAGGATGCTGTATGCAGCTGGAACATTGATGCGGGGTTCATACGATAGTGCTGGAATTGGCAGTAATGCTGGAGTAGTCACACCAGAACAGGTGAATAACCtggtttcaaatttcaatatgttGGAACAAATTGGAAGCTCTGAAATGAATCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCCATAATAGATTTTGTTAAGGCTCTATGCAAGGTCTCTATGGAGGAACTAAGATCTCCATCTGATCCACGCGTTTTCAGCCTTACAAAGATGGTTGAGATTGCGCACTATAATATGAACCGCATCCGGCTTGTGTGGTCAAGCATCTGGCATGTTCTCTCTGATTTTTTTGTAACCATTGGATGTTCTGCAAACCtttcaattgcaatttttgCAATGGATTCCTTGCGGCAGTTGTCAATGAAATTTCTGGAGCGGGAAGAGTTGGctaattataattttcaaaatgaatTCATGAAGCCTTTTGTCATTGTTATGCGAAAGAGTAATGCTGTTGAAATTAGAGAACTAATTATCAGATGCGTATCTCAAATGGTTCTTTCTCGTGTCAACAATGTCAAATCGGGGTGGAAGAGCATGTTCATGGTATTCACTACAGCAGCTTATGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATTATCGAGAAGATTATTCGAGATTACTTTCCATACATTACTGAGACTGAAACCACCACCTTCACAGACTGTGTTAATTGTCTAATTGCATTCACCAATAGTAGATTCAACCAAGAGATTAGCTTAAATGCCAttggttttctttctttctgtgcAACAAAACTAGCCGAAGGAGACCTTGGCTCATCATCCAGGAATAAAGATAAGGAAGTTTCAGGAAAGATTTCCTCACCTTCACCTCAAGAAGGAAAAGATGGGAACCAAGATAAAGGAGAGTTGATCGACAAGGACGATCATCTCAATTTCTGGTTTCCTCTATTGTCAGGTCTGTCCGAGCTTAGCTTTGACCCAAGGCCTGAGGTTAGGAAGAGTGCCCTGGATGTCCTGTTTGAAACCTTACGTAACCATGGCCATCTCTTTTCGCTACCTTTATGGGAAAGAATATTTGAGTCTGTCCTCTTTCCTATATTTGATTATGTTCGACATGCTATTGATCCTTCAGGGAGTCCACAGGTCAATGAAGTAGAGACTAATGGTGAGCTTGATCAAAGTTGGCTTTATGAGACATGCACAGTGGCCCTCCAACTGGTTGTAGATCTTTTTGTCAACTTTTACAATACAGTCAATCCTCTTTTAAGAAAGGTCCTGATGCTCCTAGTAAGCTTCATAAAGCGCCTTCATCAAAGCCTCGCTGGCATAGGTATTGCTGCATTTGTTCGATTGATGAGTAATGCTGGAGAGCTATTTTCTGATGACAAGTGGTTAGAAGTGGTTTTGTCGATAAAAGAAGCAGCAAATGAAACACTCCCCAAATTTTCATTCCTCGAAAGTGAAGACTTTGTGGCTAGAAATGATGATAGAGATCGTGTTGAGTCTGGGCCACCAGATGATTTAGAAAGCCTAAGTGTTCGCCGTCTCTATGTTTCTTTCACCAATGCAAAAGGCCGAGCAGCTGTTCAGCTTTTATTGATTCAGGCTGTGATGGAGGTCTACACCATGTTTCGGTCTCACCTTTCAGCTAAAACCATGCTAGTCCTATTTGATGCTTTGCATGGTGTAGCATTACATGCccataacataaacaaaaatgcTATATTGCGTTCCAAGCTTCAAGAGTTTGGTTCTATGATCCAAATGCAAGATCCGCCACTGTTACGTCTTGAAAATGAGTCTTACCAAACATGCCTTACATTTTTACAGAATCTTGTTGTTGACAAGCCTCCTAGTTATGAGGAAGCAGAGGTGGAATCTCATCTTGTTCGGCTTTGTCAGGAGGTTTTGGAGTTTTATATTAAAGTTGCAGGTTGTGACGAAAATTCAGAATTTTCTCATGGGAGAAAAACACATTGGTCAATTCCTTTAGGCTCTGTGAAGCGGAGAGAATTAGCTGCACGCTCGCCTCTTGTTGTGGCTACTCTGCAGGCTATTTGTAGCTTGGGTGATATTTCTTTTGAGAAGAACCTGTCTCATTTTTTCCCTCTGCTATCTAGCTTGGTAAGTTGTGAACATGGTTCAAATGAGGTCCAAGTTGCCCTTTGTGACATGCTTAGTGTATCAGTTGGCCCTGTTTTGTTACAGTCATGTTGA 5313 0.4071 MASSEAYSRLSQLVVPALDKIIKNASWRKHAKLAHECKSVIERLSLSNHQLPPDSPSDTEPETPGPLHDGGPVEYSLAESESILTPLINAAGSGVLKIADPAVDAIQKLIAHGYLRGEADPCGTSGEAKLLSNMIESVCKCHDFGDEGMELLVLKTLLSAVTSISLRIHGDCLLQIVRTCYDIYLVSKNMVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMAPVEQSDVDSSMTLFVQGFITKIMQDIDGVLNPVTPSGKVSLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGELVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEASADPELMKGKIVALELLKILLENAGAVFRTSDRFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKMIVLRFLKKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTLLPPQEPTLKLEAMKCLVDILKSMGDWMNKQLRIPDPHSAKKVETADNSYDAGGSAMANGNGVDPVEGSDSHSEIPNDTSDVSTIEQRRAYKLELQEGITLFNRKPKKGIEFLINANKVGDSPEDIATFLKDASGLDKTLIGDYLGEREELSLKVMHAYVDSFNFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYWKCNPTAFSSADTAYVLAYSVIMLNTDAHNHMVKDKMSADDFIRNNRGIDDGKDLPEEYLKSLYDRISRNEIKMKESDMAAQQRQAVNPNKLLGLDSILNIVVRKRDESQMETSDDLIRHMQEQFKEKARKTESVYYAATDAVILRFMIEVCWAPMLAAFSVALDQSDDEIVICLCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIYAIKEIITIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFSFPQNDLEQTKQAKSTILPVLKKKGHGRMLYAAGTLMRGSYDSAGIGSNAGVVTPEQVNNLVSNFNMLEQIGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKMVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNQEISLNAIGFLSFCATKLAEGDLGSSSRNKDKEVSGKISSPSPQEGKDGNQDKGELIDKDDHLNFWFPLLSGLSELSFDPRPEVRKSALDVLFETLRNHGHLFSLPLWERIFESVLFPIFDYVRHAIDPSGSPQVNEVETNGELDQSWLYETCTVALQLVVDLFVNFYNTVNPLLRKVLMLLVSFIKRLHQSLAGIGIAAFVRLMSNAGELFSDDKWLEVVLSIKEAANETLPKFSFLESEDFVARNDDRDRVESGPPDDLESLSVRRLYVSFTNAKGRAAVQLLLIQAVMEVYTMFRSHLSAKTMLVLFDALHGVALHAHNINKNAILRSKLQEFGSMIQMQDPPLLRLENESYQTCLTFLQNLVVDKPPSYEEAEVESHLVRLCQEVLEFYIKVAGCDENSEFSHGRKTHWSIPLGSVKRRELAARSPLVVATLQAICSLGDISFEKNLSHFFPLLSSLVSCEHGSNEVQVALCDMLSVSVGPVLLQSC 1770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01267 1770 Pfam Dimerisation and cyclophilin-binding domain of Mon2 7 214 IPR032629 -
Tsu08g01267 1770 MobiDBLite consensus disorder prediction 1301 1333 - -
Tsu08g01267 1770 Pfam BIG2 C-terminal domain 1561 1758 IPR046455 -
Tsu08g01267 1770 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 343 501 IPR032691 -
Tsu08g01267 1770 ProSiteProfiles SEC7 domain profile. 607 794 IPR000904 GO:0005085|GO:0032012
Tsu08g01267 1770 Pfam Sec7 domain 615 796 IPR000904 GO:0005085|GO:0032012
Tsu08g01267 1770 MobiDBLite consensus disorder prediction 48 72 - -
Tsu08g01267 1770 MobiDBLite consensus disorder prediction 577 606 - -
Tsu08g01267 1770 SMART sec7_5 611 796 IPR000904 GO:0005085|GO:0032012
Tsu08g01267 1770 CDD Sec7 614 796 IPR000904 GO:0005085|GO:0032012
Tsu08g01267 1770 Pfam C-terminal region of Mon2 protein 1343 1421 IPR032817 -
Tsu08g01267 1770 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 10 1763 - -
Tsu08g01267 1770 SUPERFAMILY ARM repeat 402 1494 IPR016024 -
Tsu08g01267 1770 Pfam Domain of unknown function (DUF1981) 1163 1245 IPR015403 -
Tsu08g01267 1770 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 10 1763 - -
Tsu08g01267 1770 SUPERFAMILY Sec7 domain 611 802 IPR035999 GO:0005085|GO:0032012
Tsu08g01267 1770 Gene3D - 689 809 IPR023394 -
Tsu08g01267 1770 Gene3D - 607 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01267 Tsu-Chr8 14183703 14195744 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01267 K18442 - gmx:100778814 3054.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01661 04 17548817 17559865 Tsu08g01267 08 14183703 14195744 PCT