Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01661 ATGGCTTCTTCGGAAGCCGATTCCCGTCTCAGCCGTGTCATCGTCCCGTCGCTCGAGAAAATCCTTAAGAACGCTTCGTGGAGAAAGCATGCTAAGCTCGCTCATGAGTGTAAATCCGTCATCGAAACCCTCACTTCGCCGCAGAAGCTTCAATCGCCGACTTCCGAAGCCGGTGCTTCCGACTCCGGTGAGCCTGAGGTTTCAGTACCTGGACCACTTCATGACGGAGGCTCCGTTGAGTATTCTTTGGCAGAGTCTGAATCGATCTTATCTCCTCTCATCAACGCTGCTGGCTCCGGCGTATTGAAGATCGCCGATCCCGCTGTTGATGCTATCCAGAAACTCATTGCCCTTGGATACCTCCGTGGTGAGGCGGACGCATCTGGAGAATGTCCTGAATCGAAGTTTCTAGCGAGCTTGATTGACTCGGTTTGCAAATGTCATGACCTAGGTGACGATGCCATGGAACTTTTGGTGCTCAAGACACTCTTGTCTGCGGTAACTTCAATTTCACTTAGAATTCACGGTGATTGTTTGCTTTTAATTGTGAGGACTTGTTATGATATCTATCTCGGTAGTAAGAATGTAGTGAATCAAACTACGGCTAAGGCCTCGTTGATTCAGATGTTGGTGATTGTGTTTAGAAGAATGGAGGCAGATTCGTCCACTGTTCCGATTCAGCCTATTGTCGTGGCTGAATTGATGGATCCAACGGAAAAATCTGATGTTGATAGCTCCATGACAGTGTTTGTGCAGGGTTTTATAACCAAAATAATGCAGGATATAGATGGTGTTTGGAATCCCTCAGGGACGCCGAGTAAGGTTGCGGCCATGGCTCATGATGGTGCGTTTCAGACCACTGCGACGGTGGAGACCACAAACCCGGCAGATTTGTTAGATTCAACCGACAAGGACATGTTGGATGCCAAGTATTGGGAGATCAGTATGTATAAGACAGCTTTGGAGGGGAGGAAAGGGGAGCTGGTGGATGGAGAGGTGGTGGAGGAGAGGGATGATGATTTGGAGATTCAGATTGGGAATAAGCTGAGGAGGGATGCTTTTTTGGTGTTCAGGGCACTTTGTAAATTGTCGATGAAGACGCCCCCTAAGGAGGCATCTGCTGATCCCCAGTTGATGAAGGGGAAGATTGTGGCTTTGGAGTTGTTGAAAATTTTGTTGGAGAATGCTGGAGCTGTCTTCAGAACTAGTGAAAGGTTTTTGGGTGCCATCAAGCAGTACTTATGCTTATCATTGTTGAAGAACAGTGCTTCAACGCTTATGATCGTATTTCAGCTATCATGCTCCATCTTCATCAGTCTGGTATCAAGATTTAGAGCTGGATTGAAAGCAGAAATTGGAGTATTTTTCCCCATGATTGTTCTCAGGGTTCTAGAAAATGTTGCCCAACCTAATTTTCAGCAAAAGATGATAGTGCTTCGTTTTCTAGAGAAACTTTGTCTTGATTCACAGATATTGGTGGacatttttataaactatgacTGTGATGTCAATTCATCAAACATATTTGAGAGGATGGTCAACGGACTTCTGAAAACCGCCCAAGGTGTCCCTCCTGGTGTAACAACCACAGTATTGCCGCCTCAAGAGGCAACTCTAAAACTGGAAGCCATGAAATGCTTGGTTGCTGTTTTAAAATCAATGGGAGACTGGATGAACAAACAAATGCGCATTCCCGATCCTCTTTCAGGCAAAAAAATTGAAGCAGTTGATAACGGCCATGAAGCTGGAGATTTTCCCCTGGCAAATGGGAATGGAGAAGACCCAGTTGAAGGATCAGATACTCATTCTGAACTCTCCAATGAGGCGTCTGATGTTTCTACTATTGAGCAACGCCGGGCTTATAAACTAGAACTTCAGGAAGGTATATCACTTTTTAATAGGAAGCCAAAGAAAGGAATTGAGTTTCTCATCAATGCCAACAAAGTGGGTAACTCACCGGAGGAGATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGTGATTATCTTGGAGAAAGGGAAGAATTATCCTTGAAAGTAATGCATGCCTATGTGGATTCTTTTGACTTTCAAGGGATGGAGTTTGATGAGGCAATTAGGATGTTTCTTCAAGGCTTTAGACTGCCTGGTGAGGCACAGAAGATTGATCGAATCATGGAAAAGTTTGCTGAACGTTATTGCAAATGTAATCAAAAAGTCTTTTCTAGTGCTGATACAGCATATGTCCTTGCTTATTCTGTGATATTGTTGAATACTGATGCTCACAATCCTATGGTGAAGAATAAGATGTCTGCTGATGATTTCATAAAAAACAACCGTGGCATAGATGATGGAAAAGATCTACCAGAGGAATACTTGAGGTCATTGTTTGAGAGAATATCTAGAAATGAGATCAAAATGAAAGATGTTGATCTGGAACACCAACAAATACAGGCAGTGAATCCTAACAAACTATTAGGCTTGGATAGCATATTGAATATTGTGATCCGTAAGCGTGGGGAAGACGGTCATATGGGGACCAGTGATGATCTAATCCGCCGTAtgcaagaagaattcagagaaaaAGCTCGCAAAACTGAGTCTGTCTATTATGCAGCAACTGATGTAGTAATCCTTAGATTCATGATCGAGGTCTGTTGGGCACCGATGTTAGCTGCTTTTAGTGTTCCTCTTGATCAAAGTGATGATGAAATTGTAACAGCTCTGTGTCTTGAAGGCTTCCGCTATGCTATTCATGTTACATCTGTAATGTCAATGAAGACACATCGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACTTCCCTGCATTCTCCCGCTGATATTAAGCAGAAAAATGTAGACGCAATCAAGGCGATAGTTACTATTGCTGATGAGGATGGGAATTACTTACAAGAAGCTTGGGAGCATATTTTGACCTGTGTTTCCCGATTTGAGCATTTACATCTTCTTGGAGAGGGGGCTCCACCAGATGCCACATTCTTTGCTTTTCCTCAGAATGATTCTGAAAAAGTAAAGCAAACTAAATCGGCTATTCTTCCGGTTTTGAAGAAGAAAGGACCTGGGAGGATGCAGTATGCAGCTGCCACGTTGATGCGGGGTTCATATGATAGTGCTGGAATTGGCAGTAATGCTGCTGGAGCTATCACATCAGAACAAGTGAACAGTCTAGTTTCTAATTTGAATATGTTGGAACAAGTTGGAAGCTCGGAAATGAGTCGCATATTCACACGGAGTCAAAAGTTGAATAGTGAGGCCATACTTGACTTCGTTAAGGCTTTATGCAAGGTCTCTATGGAGGAACTGAGATCTCCATCTGATCCACGGGTTTTCAGCCTTACCAAGATAGTAGAGATTGCGCACTATAACATGAACCGTATCCGGCTTGTGTGGTCAAGCATCTGGCACGTTCTTTCAGATTTCTTTGTAACCATTGGTTGTTCAGGAAATCtttcaattgcaatttttgCTATGGATTCCTTGCGCCAGTTGTCGATGAAATTTCTTGAGCGGGAAGAGTTGGCTAACTATAATTTCCAAAATGAGTTTATGAAGCCTTTTGTGATTGTTATGAGAAAGAGTAGTGCTGTTGAAATTAGAGAACTTATTATCAGATGTGTCTCTCAAATGGTTTTATCCCGTGTCAACAATGTCAAATCAGGATGGAAGAGCATGTTCATGGTATTTACAACAGCAGCATATGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATTATCGAGAAGATTATACGAGATTACTTTCCATACATCACTGAGACTGAAACCACCACCTTTACAGATTGTGTCAATTGTCTAATTGCATTCACCAATAGTAGATTTAACAAAGAGATTAGCCTAAATGCTATCACTTTTCTTCGATTTTGTGCAACAAAACTAGCTGAAGGAGACCTTGGCTCTTCGAGGAATAAAGGCAAGGAAACTTTTGGAAAGATTTCCACACCTTCACCTCGAACTGGAAAAGAGGGGAGACAAGATAATGGAGAGGTGACAGACAAAGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCTGGTTTGTCTGAGCTTAGCTTTGACCCAAGGCCGGAGATACGGCAGAGTGCTTTGCAAATCCTATTTGAAACCTTACGCAACCATGGCCACCTCTTTTCACTGCCTTTATGGGAAAGAGTATTTGAATCAGTCCTATTCCCAATTTTTGATTATGTTCGCCATGCTATTGATCCTTCAGGGAGTAGCTCCCAGGTCAGTGAAGTAGAGACTGATGGTGAGCTTGACCAAGATGCGTGGCTCTATGAAACATGCACATTAGCCCTCCAATTGGTGGTAGATCTTTTTATCAACTTCTACAACACTGTTAACCCACTTTTAAAAAAGGTGCTGATGCTCCTTGTAAGCTTTATAAAGCGCCCTCATCAAAGCCTGGCTGGAATTGGTATTGCAGCATTTGTTCGTTTGATGAGTAATGCTGGGGAGCTGTTTTCTGATGAGAAGTGGTTAGAAGTGGTTTTGTCACTAAAGGATGCAGCAAATGCAACACTCCCTAACTTTTCGTTCCTTGATGGTGGAGACTTTGTGACTGGAAATGAACGTGCTTCAAAAGCTGAAGATGACACAGATCCTGCTGAGTCTAGCTCACATGATAATTTAGAAAGCCCAAGGACGGACCGTCTTTATGCTTATTTATCTGATGCAAAATGTCGAGCAGCTGTTCAGCTTTTATTGATTCAGGCGGTAACGGAGGTCTATAACATATACCGCACTCAACTTTCAGCAAAAGCCATGCTAGTCCTCTTTGATGCTTTGCATAACGTGGCATCACATGCTCACAAGATTAACAGCAATACTATTTTACGCTCGAAGTTACAAGAGTTTGGGTCTATGACCCAAATGCAAGACCCTCCACTGTTACGCCTTGAGAATGAATCCTACCAAATATGCATCACATTTTTACAGAACCTTGTGGTTGACAAACCACCTAGCTATGAGGAGGCTGAGGTTGAGACAAATCTAGTTCGGCTATGTCAGGAGGTCTTGGGATTTTATATTGAAGTAGCAGGCTCTGGACAAGTATCTGAATCTTCTCATGGTAGGCCGCAACATTGGTTAATTCCTCTAGGCTCTGGGAAGCGAAGAGAGTTAGCTGCACGTGCACCACTTATTGTGACCACTCTTCAGACTATTAGTAGTTTGGGAGATATTTCTTTTGAGAAGAATCTGGTGAATTTTTTCCCTCTTCTATCAAGCTTGATAAGTTGTGAACATGGATCAACTGAGGTTCAGGTAGCTCTCAGTGACATGCTTAGTTTATCTGTTGGTCCTCTTTTGCTACGATCATGTTGA 5364 0.4234 MASSEADSRLSRVIVPSLEKILKNASWRKHAKLAHECKSVIETLTSPQKLQSPTSEAGASDSGEPEVSVPGPLHDGGSVEYSLAESESILSPLINAAGSGVLKIADPAVDAIQKLIALGYLRGEADASGECPESKFLASLIDSVCKCHDLGDDAMELLVLKTLLSAVTSISLRIHGDCLLLIVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMDPTEKSDVDSSMTVFVQGFITKIMQDIDGVWNPSGTPSKVAAMAHDGAFQTTATVETTNPADLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEVVEERDDDLEIQIGNKLRRDAFLVFRALCKLSMKTPPKEASADPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLMIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLCLDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTVLPPQEATLKLEAMKCLVAVLKSMGDWMNKQMRIPDPLSGKKIEAVDNGHEAGDFPLANGNGEDPVEGSDTHSELSNEASDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGNSPEEIAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFDFQGMEFDEAIRMFLQGFRLPGEAQKIDRIMEKFAERYCKCNQKVFSSADTAYVLAYSVILLNTDAHNPMVKNKMSADDFIKNNRGIDDGKDLPEEYLRSLFERISRNEIKMKDVDLEHQQIQAVNPNKLLGLDSILNIVIRKRGEDGHMGTSDDLIRRMQEEFREKARKTESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEIVTALCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKVKQTKSAILPVLKKKGPGRMQYAAATLMRGSYDSAGIGSNAAGAITSEQVNSLVSNLNMLEQVGSSEMSRIFTRSQKLNSEAILDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAITFLRFCATKLAEGDLGSSRNKGKETFGKISTPSPRTGKEGRQDNGEVTDKDDHLYFWFPLLAGLSELSFDPRPEIRQSALQILFETLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGSSSQVSEVETDGELDQDAWLYETCTLALQLVVDLFINFYNTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVLSLKDAANATLPNFSFLDGGDFVTGNERASKAEDDTDPAESSSHDNLESPRTDRLYAYLSDAKCRAAVQLLLIQAVTEVYNIYRTQLSAKAMLVLFDALHNVASHAHKINSNTILRSKLQEFGSMTQMQDPPLLRLENESYQICITFLQNLVVDKPPSYEEAEVETNLVRLCQEVLGFYIEVAGSGQVSESSHGRPQHWLIPLGSGKRRELAARAPLIVTTLQTISSLGDISFEKNLVNFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 1787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01661 1787 MobiDBLite consensus disorder prediction 1311 1342 - -
Tsu04g01661 1787 ProSiteProfiles SEC7 domain profile. 614 801 IPR000904 GO:0005085|GO:0032012
Tsu04g01661 1787 Gene3D - 695 811 IPR023394 -
Tsu04g01661 1787 CDD Sec7 621 803 IPR000904 GO:0005085|GO:0032012
Tsu04g01661 1787 Gene3D - 602 694 - -
Tsu04g01661 1787 SUPERFAMILY Sec7 domain 618 809 IPR035999 GO:0005085|GO:0032012
Tsu04g01661 1787 MobiDBLite consensus disorder prediction 580 611 - -
Tsu04g01661 1787 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 350 508 IPR032691 -
Tsu04g01661 1787 SUPERFAMILY ARM repeat 385 1510 IPR016024 -
Tsu04g01661 1787 MobiDBLite consensus disorder prediction 1537 1559 - -
Tsu04g01661 1787 Pfam Sec7 domain 622 803 IPR000904 GO:0005085|GO:0032012
Tsu04g01661 1787 Pfam BIG2 C-terminal domain 1578 1776 IPR046455 -
Tsu04g01661 1787 MobiDBLite consensus disorder prediction 1319 1334 - -
Tsu04g01661 1787 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 220 IPR032629 -
Tsu04g01661 1787 MobiDBLite consensus disorder prediction 44 61 - -
Tsu04g01661 1787 Pfam C-terminal region of Mon2 protein 1352 1427 IPR032817 -
Tsu04g01661 1787 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 9 1780 - -
Tsu04g01661 1787 SMART sec7_5 618 803 IPR000904 GO:0005085|GO:0032012
Tsu04g01661 1787 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 9 1780 - -
Tsu04g01661 1787 Pfam Domain of unknown function (DUF1981) 1172 1254 IPR015403 -
Tsu04g01661 1787 MobiDBLite consensus disorder prediction 44 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01661 Tsu-Chr4 17548817 17559865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01661 K18442 - gmx:100789988 3109.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01661 04 17548817 17559865 Tsu08g01267 08 14183703 14195744 PCT