Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01261 ATGGCTATGTTCAGAGGACTCACTTCCCGAATTTCCCGTTCACTATATACTAACCTCAGCTacagGACCCCATGCCGGAAGTCTCCACTTGCAACTGCACTACCCAGTTTTGGCCGCCCAATGAGCACATCTGCGGTGAAAGAAAGGACCTCAATGGAGGAGTTGAGGAGTCTGAGAATAGTAACTGCTGTCAAGACTCCATACCTATCCGATGGCCGATTTGATCTCCATACATATGATAACTTGGTGAACATGCAGATTGCAAAAGGTGTCGAAGGTATCCTTGTTGCTGGCACAACTGGTGAAGGCTATTTAATGACATGGGATGAACAAATAATGCTTATAGCGCACACAGTCAACTCTTTCGGCGACAAAGTTAAGGTTATTGGCAACGCCGGAAGCAACTGCACATCAGAAGCAATAACTGCCACTGAGCAAGGTTTTGCTGTTGGAATGGATGCTGCAATGCACATAAACCCTTACTACGGAAAAACATCATCCGACGGTTTGATTGCTCACTACAATAGTGTGCTTTCAATCGGCCCGGTGATCATATACAACGTACCGACAAGAACCTCTCATGATATTCCACCTAGTGTCGTTGAAACCTTGTCTGAAAATCCTAACTTGGTCGGCATTAAAGAGTGTATAGGAAACGAAAGGGTGAAAATGTATACAAGTAAGGGACTTCATGTTTGGACCGGGAACGACGAAGAAAGCCATGATGCTCGATGGGAATGCGGTGCTACCGGACTTCATTCTGTAGCCGGAAACTTGGTTCCTGGTTTGATGAGGAAACTCATGTTTGAAGGTAAGAATCCTACATTGAATGCAAAGTTAAAGCCTTTGTTTGATTGGCTTTTTCACGTGCCGGTACCGGTTGCCGTGAACACTGCTCTTGCTCAACTTGGGGTTATTAGGCCAATTTTCAGGCTACCACATGTTCCTATTCCTGTGGAGAAGAGGAAAGAGTTTGTGAATTTGGTGAAGGAAATTGGTAGAGAGAATTTTGTTGGTGAAAAAGATGTTCAAGttcttgatgatgatgaatttatTGTTGTTGCTCGATATTAA 1074 0.4339 MAMFRGLTSRISRSLYTNLSYRTPCRKSPLATALPSFGRPMSTSAVKERTSMEELRSLRIVTAVKTPYLSDGRFDLHTYDNLVNMQIAKGVEGILVAGTTGEGYLMTWDEQIMLIAHTVNSFGDKVKVIGNAGSNCTSEAITATEQGFAVGMDAAMHINPYYGKTSSDGLIAHYNSVLSIGPVIIYNVPTRTSHDIPPSVVETLSENPNLVGIKECIGNERVKMYTSKGLHVWTGNDEESHDARWECGATGLHSVAGNLVPGLMRKLMFEGKNPTLNAKLKPLFDWLFHVPVPVAVNTALAQLGVIRPIFRLPHVPIPVEKRKEFVNLVKEIGRENFVGEKDVQVLDDDEFIVVARY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01261 357 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE 1 357 - -
Tsu08g01261 357 ProSitePatterns Dihydrodipicolinate synthase signature 1. 93 110 IPR020624 GO:0016829
Tsu08g01261 357 Gene3D Aldolase class I 51 357 IPR013785 -
Tsu08g01261 357 PRINTS Dihydrodipicolinate synthase signature 126 144 IPR002220 GO:0016829
Tsu08g01261 357 PRINTS Dihydrodipicolinate synthase signature 158 174 IPR002220 GO:0016829
Tsu08g01261 357 PRINTS Dihydrodipicolinate synthase signature 181 198 IPR002220 GO:0016829
Tsu08g01261 357 PRINTS Dihydrodipicolinate synthase signature 90 111 IPR002220 GO:0016829
Tsu08g01261 357 CDD DHDPS 59 329 IPR005263 GO:0008840|GO:0009089
Tsu08g01261 357 SUPERFAMILY Aldolase 60 333 - -
Tsu08g01261 357 Pfam Dihydrodipicolinate synthetase family 58 331 IPR002220 GO:0016829
Tsu08g01261 357 ProSitePatterns Dihydrodipicolinate synthase signature 2. 186 216 IPR020625 GO:0016829
Tsu08g01261 357 PANTHER DIHYDRODIPICOLINATE SYNTHASE 1 357 IPR002220 GO:0016829
Tsu08g01261 357 SMART DHDPS_2 57 333 IPR002220 GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01261 Tsu-Chr8 14110106 14113633 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01261 K01714 - gmx:100806626 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01666 04 17596945 17607048 Tsu08g01261 08 14110106 14113633 PCT