Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01226 ATGGCGCCAAAGCGAGGGATTCATTTTGTCAAGAACGGAAGCAAAGGAATTCGTTTTCCTGTTTTGAGATTCCTTCTCTTCTGTGTTCTTGTTCCCACTGTTTTCTTCTTCGGTCGAGGTTTTCATGTTGCTGATCAAGATGATATTTCAGCTGTTCCAAATACACAGCCGGTTGCCAAATGGAGAGAATGGCATGCATTGCAAGAccttaaatcaattttttcgaAAGAGGTCTTTGATGTTATTGTATCCAGCACAGACGATATGGGGCCTTTGAGTCTTGacaattttagaaaaaatttgtcTGCGTCATGGAGAGTTGTTGGATTAGAGACTTCAAATGTTGCCGATGAGataaAGCAACCAACAACACATGTTAGACAAGAAAAACCAAAGGTGAAGGAAGGAAAATCTTCAGAGGGTCTTGCTCAGTGGACTGATAGCCCTGCACGACAAGTCCGAAGGcaattaatagaaaaaagGCGGGAAAAGCGTGCCGCAGAGTTGGTAAAGATGGACAATGAAGTAATTGTAAAACTTGAAAATGCAGCTATTGAACGCTCAAGATCTGTTGAGTCAGCCGTACTGGGTAAATACAACATTTGGAGGAAAGAAGTTGAGAATGAAAATGCTGATTCTTCTGTTCGGTTTATGCGGGACCAGATCATTATGGCTAGGGTATATGTGAGTATTGCAAAGATGAAGGACATGCTTGAACTGTACCAAGAGTTGCAATTTCGGCTCAGAGAGAGTCAACATGCTTTAGGTGATGCAATTACCGATTCAGATCTTCATCACAGTACACGTGAACAAATAAAGGCTATGGGCCAAGTTCTGTCAAAAGCACGAGGGCAATTGTATGACTGCAAGTTGGTCACTGTAAAATTGAGAGCAATGCTACAAACAGCTGATGAGCAAGTTAGGGGCTTCAAGAAACAAAGCACATTTCTCAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATTCATTGCTTATCTATGCGCCTCACAATAGATTACTACCTCCTTTCTCCTGAAAAGAGGAAGTTCCCTAGAAGCGAGAACTTGGAGAATCCCAGTCTTTATCATTATGCACTATTTTCAGACAATGTCTTGGCTGCATCTGTCGTTGTGAACTCTGCTGTTATGAATGCAAAGGATCCTTCAAAGCATGTTTTCCACCTTGTTACTGATAAACTCAATTTTGGAGCCATGAACATGTGGTTTCTTTTGAACCCTCCTGGAAAAGCTACAATCCATGTTGAAAATGTGGATGATTTTAAGTGGTTGAACTCATCCTACTGCCCTGTATTGCGGCAGCTTGAATCTTCAAAAATGAAAGAGTATTATTTCAAGGCAGGCCATCCAACCCTTACTTCTGGTGCTTCCAATATGAAATATAGGAACCCAAAATATCTCTCGATGCTCAACCATCTGAGATTCTATCTTCCTGAAGTTTATCCTAAATTAgataaaatcatttttcttgATGATGACATTGTTGTTCAGAAGGATTTGACTGGATTATGGGAAGTTGATCTTCAGGGGAAAGTGAACGGTGCAGTTGAAACATGTGGTGAGAGCTTTCACCGATTTGACAAATATCTTAACTTTTCAAATCCACATATTGCACGAAATTTTGATCCAAATGCTTGTGGTTGGGCATATGGGATGAACGTATTTGATCTCAAGGAGTGGAAAAAGAAGGATATCACTGGCATATATCACAAGTGGCAAAATATGAATGAAGACAGAGTGCTGTGGAAGCTGGGTACATTACCTCCAGGGCTAATGACATTCTATGGGCTGACACATCCGCTAAATAAATCGTGGCATGTCCTTGGTTTGGGTTATAGTCCAACTGTAGATCGATCAGTGATAGAAAATGCGGCAGTTGTACACTACAATGGTAATATGAAGCCGTGGCTAGAGATTGCCATGTCAAAGTATCGGCCTTACTGGACTAAATATGTCAAATACAATCATCCCTATCTTAAGAACTGTAAGTTACTTGAATAG 2019 0.3977 MAPKRGIHFVKNGSKGIRFPVLRFLLFCVLVPTVFFFGRGFHVADQDDISAVPNTQPVAKWREWHALQDLKSIFSKEVFDVIVSSTDDMGPLSLDNFRKNLSASWRVVGLETSNVADEIKQPTTHVRQEKPKVKEGKSSEGLAQWTDSPARQVRRQLIEKRREKRAAELVKMDNEVIVKLENAAIERSRSVESAVLGKYNIWRKEVENENADSSVRFMRDQIIMARVYVSIAKMKDMLELYQELQFRLRESQHALGDAITDSDLHHSTREQIKAMGQVLSKARGQLYDCKLVTVKLRAMLQTADEQVRGFKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLSPEKRKFPRSENLENPSLYHYALFSDNVLAASVVVNSAVMNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDDFKWLNSSYCPVLRQLESSKMKEYYFKAGHPTLTSGASNMKYRNPKYLSMLNHLRFYLPEVYPKLDKIIFLDDDIVVQKDLTGLWEVDLQGKVNGAVETCGESFHRFDKYLNFSNPHIARNFDPNACGWAYGMNVFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPTVDRSVIENAAVVHYNGNMKPWLEIAMSKYRPYWTKYVKYNHPYLKNCKLLE 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01226 672 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 364 667 IPR029044 -
Tsu08g01226 672 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 13 672 IPR029993 GO:0047262
Tsu08g01226 672 SUPERFAMILY Nucleotide-diphospho-sugar transferases 362 668 IPR029044 -
Tsu08g01226 672 Pfam Glycosyl transferase family 8 331 646 IPR002495 GO:0016757
Tsu08g01226 672 PANTHER HEXOSYLTRANSFERASE 13 672 - -
Tsu08g01226 672 MobiDBLite consensus disorder prediction 124 145 - -
Tsu08g01226 672 CDD GT8_like_1 362 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01226 Tsu-Chr8 13587837 13594083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01226 1 672 Glycosyltransferase AT3G61130 71.598 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01226 K13648 - gmx:100811181 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01226 08 13587837 13594083 Tsu08g01226 08 13587837 13594083 ECH
Tsu04g01688 04 17851936 17856687 Tsu08g01226 08 13587837 13594083 PCT