Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01688 ATGAACCCACACACAATGCCGCTTAACAACAGAAGCAAGGGATCTCCTTTTCCTCTTCTcgcttttcttcttctcttccttctcgCACCCCTCCTTTTCTTCTTCGCCCTTCACACTTCTTCCGATCACAATGATATTTCAGATGGTACAAGCCAACAGGCTTCCAAATGGAGAGAACAGAAGGCCCTACACGACCTTAAatctctttttccaaaagaGgtttttgaTATGATTATGTCGAGCACAAATGATATGGGGCCTTTGAGTCTAGAAAATTTCAGAAATAATCTTTCTGCCTCATGGAGAGTTGCTGGGTTAAAGACTTCAAACGCTACATATCAGCTAAACAAACCAGAAACACATCTTagacaagaaaaacaaaaggagAAGGAAGGAAAATCTTCAGTTGGTCTTCCTCAGTGGACTGATAGTCCTGTAAAGCTAGCCAGAAGGCAATTAATAGAGAAAAGGATGGCAAAGCGTGCTGCTGAGTTGGTAAAACAGGATGATGAAGTTATTGTGAAGCTTGAAGATTTAGCTATTGAACGTTCAAAATCAGTTGATTCAGCAGTTCTAGGTAAATACAACATTTGgaggaaagaaaatgaaaatgagaatGCTGATTCTACTGTTCGGTTGATGCGAGATCAGATTATTATGGCTAGGGTATACTTGAGTATAGCAAAGATGAAGAACAAGCTTGATTTGTACCAAGAACTGCAAACACGACTTAAAGAGAGTCAGCGTGCTTTAGGTGAGGCAACTTCTGATGCTGACCTACACCAAAGTGAACATGAAAAAATCAAAGCTATGGGCCAAGTTCTTTCTAAGGTCAAAGATCAATTGTATGACTGCAAGTTGGTTACTGGGAAATTGAGGGCAATGCTACAAACTGCTGATGAGCAGGTTAGAGGCTTGAAGAAACAAAGCACATTCCTTAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATTCACTGCTTATCGATGCGCCTTACCATAGATTACTACCTCCTTGCACCTGAAAAGAGAAAGTTCCCTAAGACTGAGAATTTGGTTAATCCCAATCTTTATCATTACGCCCTATTCTCAGACAATGTTTTGGCTGCATCTGTTGTTGTCAACTCAACTGTTTTAAATGCAAAGGATCCTTCAAAGCATGTGTTTCACCTTGTTACGGATAAACTAAATTTTGGAGCCATGAACATGTGGTTTTTATTGAATCCTCCTGGAAAAGCTACAATCAATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCATCCTACTGCCCAGTCCTGAGACAGCTTGAATCGGCAACAATGAAAGAGTATTATTTCAAGGCAGGCCACCCATCCACCACTGGTGCTTCTAATCTGAAGTACAGAAATCCAAAATATCTTTCAATGCTCAACCACCTGAGGTTCTATCTTCCACAAGTCTATCCAAAATTGGATAAGATTCTTTTCCTTGATGATGACATCGTTGTCCAGAAGGATTTGACTGGATTATGGGCTGTGGATCTTCATGGAAAAGTAAATGGTGCAGTCGAAACATGTGGTGAGAGCTTTCACCGATTTGACAAGTATCTTAACTTTTCTAATCCACATATTGCGAAAAACTTTGATCCCAATGCATGTGGTTGGGCATATGGAATGAACATATTTGATTTGAAGGTGTGGAAAAAGAAGGACATTACTGGCATATATCACAGGTGGCAGAACTTGAACGAAGACAGGGTACTGTGGAAATTAGGGACATTACCTCCAGGGCTAATGACATTCTATGGATTAACACATCCCCTGAATAAATCATGGCATGTACTTGGTTTGGGTTACAGTCCAAGTATAGATCGTACCGAGATTGAGAATGCAGCAGTTGTACACTACAATGGTAATATGAAGCCATGGTTAGAGATAGCCATGACAAAGTATCGCCCTTATTGGAGCAAATATGTCAAGTATAGCCATCCTTATCTTAGGAACTGTAAGTTAAGTGAATGGTCTTCATAA 2013 0.384 MNPHTMPLNNRSKGSPFPLLAFLLLFLLAPLLFFFALHTSSDHNDISDGTSQQASKWREQKALHDLKSLFPKEVFDMIMSSTNDMGPLSLENFRNNLSASWRVAGLKTSNATYQLNKPETHLRQEKQKEKEGKSSVGLPQWTDSPVKLARRQLIEKRMAKRAAELVKQDDEVIVKLEDLAIERSKSVDSAVLGKYNIWRKENENENADSTVRLMRDQIIMARVYLSIAKMKNKLDLYQELQTRLKESQRALGEATSDADLHQSEHEKIKAMGQVLSKVKDQLYDCKLVTGKLRAMLQTADEQVRGLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLAPEKRKFPKTENLVNPNLYHYALFSDNVLAASVVVNSTVLNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATINVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPSTTGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVDLHGKVNGAVETCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNIFDLKVWKKKDITGIYHRWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPSIDRTEIENAAVVHYNGNMKPWLEIAMTKYRPYWSKYVKYSHPYLRNCKLSEWSS 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01688 670 MobiDBLite consensus disorder prediction 119 133 - -
Tsu04g01688 670 CDD GT8_like_1 358 654 - -
Tsu04g01688 670 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 360 661 IPR029044 -
Tsu04g01688 670 PANTHER HEXOSYLTRANSFERASE 10 667 - -
Tsu04g01688 670 SUPERFAMILY Nucleotide-diphospho-sugar transferases 358 664 IPR029044 -
Tsu04g01688 670 MobiDBLite consensus disorder prediction 117 141 - -
Tsu04g01688 670 Coils Coil 227 257 - -
Tsu04g01688 670 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 10 667 IPR029993 GO:0047262
Tsu04g01688 670 Pfam Glycosyl transferase family 8 327 641 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01688 Tsu-Chr4 17851936 17856687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01688 12 667 Glycosyltransferase AT3G61130 73.788 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01688 K13648 - gmx:100798073 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01688 04 17851936 17856687 Tsu04g01688 04 17851936 17856687 ECH
Tsu04g01688 04 17851936 17856687 Tsu08g01226 08 13587837 13594083 PCT