Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu08g01004 | ATGTGGAACACCATTGCCAATTTGAAAGAGAACTTGAACAAGATCGCACTCGATGTTCACGAACAAGACGAAGAAGATCAAATGTTCCACATCTACGGCGAGGAATCTTCGGTCTCAGATCGCCGGAATTCTAACGGATTCCTCCGTTCATCTGGAATTAGGTTGCCACTCGCTAATGGTGTTgatcatgtttctatttctgaGACAGAACAATACAAAGCTGAAATCAAGAGACTTCAAGCCTCCGAGGCAGAAATTAAAGCACTGTCGGTTAATTATGCAGctctattaaaagaaaaagagGATCAGATTGTTagattaaataaagaaaatggtTCACTAAAGCAGAATTTGGTGGCTACAAATACTGCTCTGAGTGCTTCCAAAGTTGAAGGTTCTAGAGCATCTACAAGTGGATCTTCTTCAATGAAGGTAGTCCTCCTGTATTCTAATTTTTGGGAGCTTGCAGATTCAGTTGATGGAAAAAGTAGGCCGTCAAAAGCTGTCCAATATTCCTCAGAGATAAGAAAGATGAAGTTAGAACTAAAGCAAGAACGTGATCAATTGGCAAAtattcaactaaaatttcatgAGGAACAGGAATTGAACAACTCTTTCCGGGAGGAGCTTAAAATGTTAAAgttggaaagagaaaaaACATCAAAGGAGATGAgcaaaatacaaaatgaattgaatGAGAAAGCATCAGAAATAAAGCATCTGCAGTTAAACTTGACTAGACGGCAAAATGAAGAAGCAGGGGAGGCTTTCAATAGCTTGAAAAGACTGATCGAAACCTTGAAGAAGGAAAACACTGCACTTAAGatggagaagaatgaaattgagGCTGCTCTTGAAAAAAGTAGGAAGTCTTTCACTGAAAAAATGTTGTCCGATGCTTTGCATGTTCAGAAAAAGGATTCGAGCAGCATCAGTGATGTGCCAGATCGTTCTGAAAAATTTCCTGGaaaggaagaaatggaaaggTCCTTACAAAAGCTAAGTGGAGATTTGAAGCAAACACAGCAAGACAGGGACAAAGCATTACAAGAATTGAGCCGCCTTAAACAGCATTTGCTGGAAAAGGCATCCGAGGAAGCAGAAAAAATGGATGACGATAGTAAAATCATTGAAGAGCTTCGTTATAGCAATAACTATTTAAGGGCTCAGATATCACATCTTGAGAGAACTCTGAAGCAAGCAATTGCAAGTCAGGAGGAGCTGAAGATGGCAACGAATAATGAAATTCTCAAGTCCAGGGAAATCATTGATGACCTAAACAAAAAGCTTACAAACTGTTTGAGCACAATAGATTCTAAAAATATTGAACTATCAAATTTACAGACAGCTCTTGGACAGTACTATGCTGAAATTGAAGCCATGGAACATTTAGAAGAAGAGTTAGCCCGGGCAAAAGAAGAGATAACTAAGCTTTCTCAACTGCTGAAAGACGCAGATCAAAGAGCAGATGCATCAAAGgctgaaaaagaagaaattttggcCAAGCTTTCCCAATCTGAGAAGGCACAAACTGAATGGAAAAGTAGAGTCAGCAAGCTTGAGGACGACAATGCCAGATTGAGGCGAGCTGTTGAGCAGAGTATGACACGGTTAAATAGAATGTCGGTGGATTCAGATTATCTTGTTGACAGGCGCATTGTTATAAAATTACTTGTAACTTATTTCCAGAGAAGTCACAGCAGAGAGGTTTTGGATCTAATGGTCCGCATGCTAGGATTCTCTGATGAAGATAAACAAAGGATAGGTGTTGCTCAGCAAGGTGCAAGCAAAGGTGTTGTTCGAGGAGTTCTTGGGTTGCCTGGCCGTCTGGTTGGAGGCATCTTGGGAGGAAGTTCATCTGAAGCAGCGGTAAATGCAGGATCTGATAACCAGTCCTTTGCAGATCTGTGGGTTGATTTTCTTCTCAAGGAAAcagaagaaagagagaagagagaaccATCATCATCAGTAAATCCAGGTACATCCACTGAAAATTCCAATGAGAAAAGTCCAAATACTATTTCTGCTATCCCCCCACTTCCCAATCAGAGGTTTGGATCTGTTCCACTTCCACCACTTCCTAATCAGAGGTTTGCATCTGCTTTTCCAATAACTTCAACTAATCAAAACATCACTCTTCTCCCTCCAAGCTATTATCAGCGTCCTGAAAACTTTGGTTCCGAGTTCTCAACAGTTCCTCTTACACCATCTGATGCCAAACCTACTGGTTCAAACCAGATACCGAGATTCTGA | 2253 | 0.3759 | MWNTIANLKENLNKIALDVHEQDEEDQMFHIYGEESSVSDRRNSNGFLRSSGIRLPLANGVDHVSISETEQYKAEIKRLQASEAEIKALSVNYAALLKEKEDQIVRLNKENGSLKQNLVATNTALSASKVEGSRASTSGSSSMKVVLLYSNFWELADSVDGKSRPSKAVQYSSEIRKMKLELKQERDQLANIQLKFHEEQELNNSFREELKMLKLEREKTSKEMSKIQNELNEKASEIKHLQLNLTRRQNEEAGEAFNSLKRLIETLKKENTALKMEKNEIEAALEKSRKSFTEKMLSDALHVQKKDSSSISDVPDRSEKFPGKEEMERSLQKLSGDLKQTQQDRDKALQELSRLKQHLLEKASEEAEKMDDDSKIIEELRYSNNYLRAQISHLERTLKQAIASQEELKMATNNEILKSREIIDDLNKKLTNCLSTIDSKNIELSNLQTALGQYYAEIEAMEHLEEELARAKEEITKLSQLLKDADQRADASKAEKEEILAKLSQSEKAQTEWKSRVSKLEDDNARLRRAVEQSMTRLNRMSVDSDYLVDRRIVIKLLVTYFQRSHSREVLDLMVRMLGFSDEDKQRIGVAQQGASKGVVRGVLGLPGRLVGGILGGSSSEAAVNAGSDNQSFADLWVDFLLKETEEREKREPSSSVNPGTSTENSNEKSPNTISAIPPLPNQRFGSVPLPPLPNQRFASAFPITSTNQNITLLPPSYYQRPENFGSEFSTVPLTPSDAKPTGSNQIPRF | 750 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu08g01004 | 750 | Coils | Coil | 5 | 25 | - | - | |
| Tsu08g01004 | 750 | MobiDBLite | consensus disorder prediction | 309 | 330 | - | - | |
| Tsu08g01004 | 750 | PANTHER | VESICLE TETHERING-LIKE PROTEIN, PUTATIVE-RELATED | 1 | 135 | - | - | |
| Tsu08g01004 | 750 | MobiDBLite | consensus disorder prediction | 655 | 680 | - | - | |
| Tsu08g01004 | 750 | Coils | Coil | 324 | 380 | - | - | |
| Tsu08g01004 | 750 | Coils | Coil | 391 | 414 | - | - | |
| Tsu08g01004 | 750 | MobiDBLite | consensus disorder prediction | 715 | 750 | - | - | |
| Tsu08g01004 | 750 | PANTHER | VESICLE TETHERING-LIKE PROTEIN, PUTATIVE-RELATED | 150 | 750 | - | - | |
| Tsu08g01004 | 750 | MobiDBLite | consensus disorder prediction | 647 | 692 | - | - | |
| Tsu08g01004 | 750 | PANTHER | MYOSIN HEAVY CHAIN - RELATED | 1 | 135 | - | - | |
| Tsu08g01004 | 750 | PANTHER | MYOSIN HEAVY CHAIN - RELATED | 150 | 750 | - | - | |
| Tsu08g01004 | 750 | Coils | Coil | 168 | 291 | - | - | |
| Tsu08g01004 | 750 | Coils | Coil | 79 | 117 | - | - | |
| Tsu08g01004 | 750 | Coils | Coil | 454 | 537 | - | - | |
| Tsu08g01004 | 750 | MobiDBLite | consensus disorder prediction | 301 | 330 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu08g01004 | Tsu-Chr8 | 11050631 | 11058686 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu08g01004 | - | - | mtr:MTR_8g028445 | 1113.98 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu08g01004 | 08 | 11050631 | 11058686 | Tsu08g01004 | 08 | 11050631 | 11058686 | ECH | |
| Tsu08g01004 | 08 | 11050631 | 11058686 | Tsu04g02073 | 04 | 22823463 | 22833714 | PCT |