Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02073 ATGTGGAGCACCATTGCCAATTTGAAGGAGAATTTGAATAAGATCGCCCTCGATGTTCACGATGACGACGAAGACGACGCCGTTTTAGCTTCGTACGGAATCCCTCCCGACGGCCAAAGTCCTACCGTCTCCGATCGCCGGAGTTCTGGTGGCTCCACGCATTCCAATTCGATTCCTAGGTCACCTGCGGCCAACGGAATTACAGATAATCCCTATGCTTCCGAGATAGAGCAATATAGAGCAGAAATCAAGAGACTTCAAGCATCTGAAGCGGAAATTAAAGCACTGTCAGTTAATTATGCAGcactattaaaagaaaaagagGATCACATCATTAGACTGAATAAGGAAAATGGCTCGTTAAAACATAATTTAGAGGCTACAAGTCCCGCATCTTCAAATGGCAATCACAAACTCAAGGGAAGCAGTGACCAGTCATCTAATCGACAGCATAGGTTCGCAGCTCAAATGAAAAACCGTTATGCTACAAACAACGGAACCATGTCTACTTTGGAATCCAATACAATTCCAAGTAAGACGGTATCTAATCATTCAAACTTACAAGTAAAGGACAAGGAGCTAGCAGATTTGGTAGAAGGAAAAAATAGCGCCACAGCAGCAGCACAAGTACAACATACTCATGAGATACAAAAATTGAAGCTGGAATTGGAGCAAGAACGAGATAAATTGGCAAACATTCAGATACAATTCCATGAGGAACAGAAATTGAACAAGTCTTTCCAAGAGGagcttaaattattaaaattggaAAGAGACAAAACTACAAATGAGGTGAGGCAATTACACAATGAAGTGAATGAAAAAGTATCAGAGATAAAACATCTGCAATTGGAGTTGACTAGACAAGAAGGTGAAGAAGCAGTTAATGCTATGGATAGCTCCAAAAGACTAATCGAAATTTTAGAGACGGAAAACACCACTCTTAAGATGGAAAAAAGTGAACTTGAGGCTGCACTCAAAGCAAGTAAGGTTTCCTTCACTAGTAAAAAGTCACCTGATGCTTTTCAAGTCCATAATAGGGATTCAAGCAGTGCCAGTGATTTGTCAGATCCTTCCAAAAGTTTTCCCGGAAAAGAAGATATGGAAATATCCGTACAGAAGATGAGTGATGATTTGAAGAAAACACAGCAGGAGAAGGACAGAGCAGTACAAGAATTGACCCGCCTTAAACAACATTTGTTAGAGAagGAAAATGAAGAGTCAGAAAAAATGGACGAGGATACCAAAATCATTGAAGAACTACGGGATAGTAATAATTACTTAAAGGCTCAAATATCACATCTCGAGAGAACTTTGAAGCAAGCTACTTCAGATCAGGAGAAATTGAAGATGGCAAACAACAGTGAAATTCTGAAGTCCAGAGAAGTCATTGATGACTTGAACAAAAAGCTTAAAAACTGTATAAGCACAATAGATGCCAAAAATATTGAACTAATAAATTTGCAGACAGCTCTTGGACAATATTATGCGGAAATCGAAGCTAAGGAACATGTAGAAGGAGAGTTGGCTCGTGCAAGGGAAGAAACAGCTAGTCTTTCTCAACTGTTGAAAGATGCAGATTGCAGAGCAGATATATTGAGgggtgaaaaagaagaaattttagCCAAGCTTTCTCAATCTGAGAAGGTACAATCAGAATGGAGAAGTAGAGTAAGCAAGCTTGAGGAAGAAAATGCGAAATTGAGACGAGCTCTTGAACAGAGTATGACACGGCTAAATAGAATGTCAGTGGATTCTGATTTTCTTGTTGACAGGCGCATTGTGATAAAACTCCTTATAACTTACTTCCAGAGAAACCACAGCAAAGAGGTTTTGGATTTGATGGTTCGCATGCTGGGATTCTCTAGTGAGGACAAGCAAAGGATAGGCCTCGCACAACAAGTTCCAGGAAAAGGTGTTGTCCGTGGTGTTCTTGGGTTGCCTGGTCGCCTGGTTGGAGGTATCTTAGGAGGAAGTTCAACTGAGTCAGCTGTAAATGTGGGATCTGATAACCAGTCCTTTGCAGATATGTGGGTTGATTTTCTTCTCAAGGAAacagaagaaagagaaaaaagggAGCTGTCAGGAAGTACAGGTGATTCCATGGGTGGTGATTCACGCGATAAAAATACTAATTCTGCTTCTTCAACACTTTCCAATCCGAGGTTTAGTACTGGAACTGCATCAATTACTTCACCTACTAATCACAACACCAGTCCAATATCTCGTGGATATTTTCAGCATTCTGAACAAATTGGTTCGGAATTCTCAACAGTTCCCCTTACATACTCAGATAGCAAAACAACTAGTTCAAAACTTCATCCTAGATActaa 2334 0.3907 MWSTIANLKENLNKIALDVHDDDEDDAVLASYGIPPDGQSPTVSDRRSSGGSTHSNSIPRSPAANGITDNPYASEIEQYRAEIKRLQASEAEIKALSVNYAALLKEKEDHIIRLNKENGSLKHNLEATSPASSNGNHKLKGSSDQSSNRQHRFAAQMKNRYATNNGTMSTLESNTIPSKTVSNHSNLQVKDKELADLVEGKNSATAAAQVQHTHEIQKLKLELEQERDKLANIQIQFHEEQKLNKSFQEELKLLKLERDKTTNEVRQLHNEVNEKVSEIKHLQLELTRQEGEEAVNAMDSSKRLIEILETENTTLKMEKSELEAALKASKVSFTSKKSPDAFQVHNRDSSSASDLSDPSKSFPGKEDMEISVQKMSDDLKKTQQEKDRAVQELTRLKQHLLEKENEESEKMDEDTKIIEELRDSNNYLKAQISHLERTLKQATSDQEKLKMANNSEILKSREVIDDLNKKLKNCISTIDAKNIELINLQTALGQYYAEIEAKEHVEGELARAREETASLSQLLKDADCRADILRGEKEEILAKLSQSEKVQSEWRSRVSKLEEENAKLRRALEQSMTRLNRMSVDSDFLVDRRIVIKLLITYFQRNHSKEVLDLMVRMLGFSSEDKQRIGLAQQVPGKGVVRGVLGLPGRLVGGILGGSSTESAVNVGSDNQSFADMWVDFLLKETEEREKRELSGSTGDSMGGDSRDKNTNSASSTLSNPRFSTGTASITSPTNHNTSPISRGYFQHSEQIGSEFSTVPLTYSDSKTTSSKLHPRY 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02073 777 Coils Coil 298 325 - -
Tsu04g02073 777 PANTHER VESICLE TETHERING-LIKE PROTEIN, PUTATIVE-RELATED 1 777 - -
Tsu04g02073 777 MobiDBLite consensus disorder prediction 689 777 - -
Tsu04g02073 777 Coils Coil 209 292 - -
Tsu04g02073 777 MobiDBLite consensus disorder prediction 335 369 - -
Tsu04g02073 777 MobiDBLite consensus disorder prediction 31 70 - -
Tsu04g02073 777 Coils Coil 365 410 - -
Tsu04g02073 777 Coils Coil 544 578 - -
Tsu04g02073 777 Coils Coil 76 124 - -
Tsu04g02073 777 MobiDBLite consensus disorder prediction 123 152 - -
Tsu04g02073 777 Coils Coil 502 529 - -
Tsu04g02073 777 PANTHER MYOSIN HEAVY CHAIN - RELATED 1 777 - -
Tsu04g02073 777 Coils Coil 418 452 - -
Tsu04g02073 777 MobiDBLite consensus disorder prediction 699 770 - -
Tsu04g02073 777 MobiDBLite consensus disorder prediction 335 358 - -
Tsu04g02073 777 MobiDBLite consensus disorder prediction 37 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02073 Tsu-Chr4 22823463 22833714 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02073 - - gmx:100794919 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02073 04 22823463 22833714 Tsu04g02073 04 22823463 22833714 ECH
Tsu08g01004 08 11050631 11058686 Tsu04g02073 04 22823463 22833714 PCT