Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00995 ATGATTGAAGAATCAAGGTGCAACATTACAACATCGACGGAGTTACTTAATGTACTAAACCGAATATGGAATCTCGAAGAACAGCATGTATCAAATATATCAGCAATGAAAGCCTTAAAAATGGAACTAGTACGGGAGAAGCAAATGAACATGCAGGAAATCGAGAAGTTAATGAAGAAAATGACGATGGAAAAGTTTTTTAGGAAGGATAAAGGACATGATAGATTTAATGTTGTACAATCACTCGAGGATGAGATAGAGCATGAAAGAAGGTTGCGAAAGCACTACAAAAGCTTGCATCAGAAGCTTGCTAAGGAGCTTTCTGAAGTAAAGTCTTCGTTCTTGGGTTGTTTGAGAAACcttgaaagagagagaaaaacacgAATCCTTTTGGAGAATTTGTGCAACGAGTTTGCAAAAGGAATTAGAGATTACGAACAAGAAGTACACTGCCTTAGGAAGAATTCTAGGAATGGTTATGTTAGAGGGGATAGCGTTGATCGGTTAATACTTCATATTTCAGAAGCTTGGCTTGACGAGCGCGCACAAATGAAGCTAGCTCAATCAGATAACGACTTCATAGAGAGAACTCCAATTGTTGAAAAGTTAGGTTTTGATATAGAAACATTTCTTCTTGCAAACCGCTCCGGTGATTTTAGAAAATACGATTACTCTTCGCCGAAGGAGCTCAAGGAAATTTACGCTATGGATTCCTTTCCACTACCTGCAAGTGCACCTCAAGATGTTGATCAGGAAGACTCCATTGATAATGACTGTTTTGAAACGAAAGAGATTGCCGTTGATGGACTCCGAAAACTCGGCTCCAGAATGCAAAGAAACATTGCTACCGAGCCCCATCGAGAAAATAAAAGAAGCGAAAGTTCAATTAGGAAAGAGGTTATGTCAAAGGAAATCACTGAGGATTGTCACTTGCAAGCAAACATGGAAAGGAACATGTCGTGTAATGACAATAATGAGAGTTGCTTCGTGGAGAAGAAACCAAATGAAATGGCAGAAGACAACATAAAACCATGGAAATCAATGTTAATTGCTTCAGATTTTGATAAAACTGTGTCTTCTACCAAATTGCCAAAGGGAGTAAAAGAAAACACATTGTTGGCAAAACTACTTGAAGCAAGGCTAGAGAGACAGATAACTAAGTCCAAAGGCGAAAAAAGTGCTGCATCTTGA 1191 0.3787 MIEESRCNITTSTELLNVLNRIWNLEEQHVSNISAMKALKMELVREKQMNMQEIEKLMKKMTMEKFFRKDKGHDRFNVVQSLEDEIEHERRLRKHYKSLHQKLAKELSEVKSSFLGCLRNLERERKTRILLENLCNEFAKGIRDYEQEVHCLRKNSRNGYVRGDSVDRLILHISEAWLDERAQMKLAQSDNDFIERTPIVEKLGFDIETFLLANRSGDFRKYDYSSPKELKEIYAMDSFPLPASAPQDVDQEDSIDNDCFETKEIAVDGLRKLGSRMQRNIATEPHRENKRSESSIRKEVMSKEITEDCHLQANMERNMSCNDNNESCFVEKKPNEMAEDNIKPWKSMLIASDFDKTVSSTKLPKGVKENTLLAKLLEARLERQITKSKGEKSAAS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00995 396 Coils Coil 79 99 - -
Tsu08g00995 396 Coils Coil 44 64 - -
Tsu08g00995 396 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 2 326 - -
Tsu08g00995 396 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 342 392 - -
Tsu08g00995 396 PANTHER GB|AAF24581.1 2 326 IPR043424 -
Tsu08g00995 396 PANTHER GB|AAF24581.1 342 392 IPR043424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00995 Tsu-Chr8 10928413 10930724 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00995 - - mtr:MTR_8g028230 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00995 08 10928413 10930724 Tsu08g00995 08 10928413 10930724 ECH
Tsu07g04658 07 51110408 51113564 Tsu08g00995 08 10928413 10930724 PCT