Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04658 AtggaaagaagagaaaaaggttTGGAGAAaagggaagaagaagatgaaggattgATAAAAATGGTAGAAAAGTTGAAACTTGTAgggaagagagaaggaagaggaaGGTCTTCAACCCCACCTCCCACTTGGAGACTTGTTGATTCTCAACACAATGTTAACACTGTTGTTCAACAAGAATTTCTCAACTTTCCCTCTTCAAAAACACTCTCTGCAAGAACACTTTGTGCTAGACTCTGGGAATTTCATTCTCACCAGCCAGCATCTGCTAGGGACTCGAGAAGGCATGTTCAAGCATCAGCTGTTCAGCACGATAGATCAATTGACAGAAATGGTTCTTCTCGACGGTCTGTGTCCCCTACTAGCTGTCGTCGCTTGATGGAAGTTACGCAAGAACCATCCAGAGAGGCAGTCAAGGTTCTCGATCGCATCTGGCATCCTGAAGAACAGGATCCGTCGAATATGGCCATAGTGAAAGCTCTGATAATGGAACTAGGTCTTTCTCAAACACAGGTAAAAGAGTTACTGcaagaaaaaaatgagaataagCAGGAAATGGAGAACTTAATGAAGCAAATAACAGAAGACAAACTTGTTAACAAGAACAAAGAACGTGAAAAGATCAAAGCCATCGTTCAATCAGTCAAGGAAGAGATTGATGTTGAAAGGAGGTTAAGAAAGCATTCAGAAAGCCTGCACCAGAAGCTGGCTAGCGAGCTTTCTGAAGTGAAGTCTTCGTTCCATGGTACTCTGAGAGATcttgaaagagagaaaaaagcAAGGATCCTTTTGGAGAATTTGTGTGATGATTTTGCCAAAGGAGTGAGAGATTATGAACATGAACTACGTTCTATTAGGCATAAAGTTAATAACGGTCATGTTAAAGGCGAAAGCCTTGATCGGCTAATACTCCATATTTCGGAAGCCTGGCTTGATGAGCGCACACAAATGAAGCTAGTTCAAGATGGTTGTGGTAACAATCTCCCACATACACATTCAATTGTCGATAAGTTACGCGTTGATATCGAAACAGTTCTTCGCGCAAAACGATCTATTGCcttaaagagaaataataacTCATCCATTAAAGAGCATAAGGAGATTCGCCCTCGCCTATCTTCATTGGATTCCTTTCAACTAAAAGAGACAATACATTCACCTCATAATTTTGGGGAGGAAGATTCCGTTAGTACCGACATTTTTGAACAGAAAAAGACTTCTGACAAAGGACATACCAAGTGTTTTGTTGAGGGGAAATCAAGTGACATTGGAAGACACAAGACAAATCTATTAAATGCTCCTAGTCCTATGGTATCAACTTTGTCTGAGACAATACAAGGTCCACCAGAACATGATAGAGGCAGGACCAAGAGAATTACTTCAGGCCACAGCCTTGTTGGAAACAGTTCCATGTCATCAGAAGGTGATAAGATATATCCTGAGACTATTTGCAGGGAAGATTCTTGTGTTCATTCTGCAGTTAAAGTTAATGGTAGTCCTGTTAAACAGTGGAAAACTACATTGATTGTACCAGATTTTAACAAGTCTCATTACAAATTACCTAAGGGAGTAAAAGACAATTCATTTATGGCAAAATTGCTTGAAGCAAGGTTAGAGGGACAAAAATCTTGCTCTAAGACTAGTAAAAGCTCTTTTTGA 1659 0.3737 MERREKGLEKREEEDEGLIKMVEKLKLVGKREGRGRSSTPPPTWRLVDSQHNVNTVVQQEFLNFPSSKTLSARTLCARLWEFHSHQPASARDSRRHVQASAVQHDRSIDRNGSSRRSVSPTSCRRLMEVTQEPSREAVKVLDRIWHPEEQDPSNMAIVKALIMELGLSQTQVKELLQEKNENKQEMENLMKQITEDKLVNKNKEREKIKAIVQSVKEEIDVERRLRKHSESLHQKLASELSEVKSSFHGTLRDLEREKKARILLENLCDDFAKGVRDYEHELRSIRHKVNNGHVKGESLDRLILHISEAWLDERTQMKLVQDGCGNNLPHTHSIVDKLRVDIETVLRAKRSIALKRNNNSSIKEHKEIRPRLSSLDSFQLKETIHSPHNFGEEDSVSTDIFEQKKTSDKGHTKCFVEGKSSDIGRHKTNLLNAPSPMVSTLSETIQGPPEHDRGRTKRITSGHSLVGNSSMSSEGDKIYPETICREDSCVHSAVKVNGSPVKQWKTTLIVPDFNKSHYKLPKGVKDNSFMAKLLEARLEGQKSCSKTSKSSF 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04658 552 MobiDBLite consensus disorder prediction 87 112 - -
Tsu07g04658 552 Coils Coil 169 218 - -
Tsu07g04658 552 MobiDBLite consensus disorder prediction 87 122 - -
Tsu07g04658 552 MobiDBLite consensus disorder prediction 425 446 - -
Tsu07g04658 552 PANTHER GB|AAF24581.1 134 550 IPR043424 -
Tsu07g04658 552 PANTHER GB|AAF24581.1 8 85 IPR043424 -
Tsu07g04658 552 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 134 550 - -
Tsu07g04658 552 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 8 85 - -
Tsu07g04658 552 MobiDBLite consensus disorder prediction 425 474 - -
Tsu07g04658 552 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 85 131 - -
Tsu07g04658 552 PANTHER GB|AAF24581.1 85 131 IPR043424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04658 Tsu-Chr7 51110408 51113564 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04658 - - ccaj:109797875 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04658 07 51110408 51113564 Tsu07g04658 07 51110408 51113564 ECH
Tsu07g04658 07 51110408 51113564 Tsu08g00995 08 10928413 10930724 PCT