Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00911 ATGGAACACAAAGCACAAAACATTTTCCTCTTTTCCTTATTCTTCACATTCATATCTATCTCCTTCAGTACCTCATACCCACTTGAATTCCAAATTCACTCACCACTCCTCCAATCTCTCCCCCACCCACCAACACTCTCATGGCCCGAATCCAAATCCACTGAACCCGACCCGGAAAATTCAACCACCCTCTACCTCCATCACATAGATGCTCTATCTTTCAACAAAACCCCACAACAACTCTTCAACCTTAGACTCCAAAGAGACACTGCTAGAGTCAAAACATTCACCTCATTAGCCTCATCTATAAACAAAACCCGGCCCGGAAAAACCGGACCCGGGTCGGGTGTAAGTAGCTCTGTAGTTTCAGGTTTAGCTTTAGGGAGTGGTGAGTATTTTACACGTATAGGAGTTGGAACACCACCAAGATATGTTTACATGATTCTTGACACTGGAAGTGATGTTGTTTGGCTTCAATGTGCACCTTGTGAGAATTGTTACTCACAAACTGACCCGGTTTTTGATCCGAAGAAATCAAGTTCTTATGCTGGAATTTCGTGTTTGTCTCCGATGTGTCGTCGGTTGGACAAGCCGGGATGTAATGGGAAAAAGGTTTGTCAGTATGAAGTCTTCTACGGTGATGGGTCGTTCACCGTAGGAGACTTCTCCACTGAAATGTTGACGTTTGGGAGAACTGGTGTTCCGCGTGTGGCTATTGGTTGTGGTCATGATAATGAGGGACTCTTTAATGGCTCGGCTGGTTTATTTGGTTTAGGCCGTGGTGGTTTATCTTTTCCAATCCAAACTGCATACCGGTTTAGACAAAAATTCTCTTATTGTTTTGTGGACCGGTTTGTTTCGAATAAACCATCTTCTATTGTTTTTGGCGACTTAGCTATTCCGCGAACCGTGTTCTTCACTCCTTTGattaaaaatcttaatttaCCCACTTTTTACTACGTTGAACTTCTTGGAATCAGCGTAGGTGGCGTGCCTGTTCGTGGCATCTCAGCTTCACTATTTCGGTTTGATAAAACAGGAGATGGGGGTGTAATTATCGACTCCGGGACTTCAGTGACACGACTCACTCGTCTTGCTTATGTGGCACTTAGAAATGCTTTTCGAATGGGGACCAGACATTTGAAACAAGAACCAGGGAACGAGCTTTTAGACACGTGTTATAATTTAGCAGGGGTTAAGGAGTTGAAGATTCCAACGGTAGTACTTCATTTTCGAGGTGCTGATATGAATTTGCCATCCGGAAATTTGCTAGTTCCGATGGACACCGACAAAAAAACTTATTGTTTTGCTTTTGCCAGAACAACGAGTAAGTTGTCTATTATAGGAAACATACAACAACAAGGTTTTCGGATCGCCTATGATTTGGCGGGTTCTCGAATTGGGTTTTCCCCGCAAGGGTGTGTGTGA 1428 0.4342 MEHKAQNIFLFSLFFTFISISFSTSYPLEFQIHSPLLQSLPHPPTLSWPESKSTEPDPENSTTLYLHHIDALSFNKTPQQLFNLRLQRDTARVKTFTSLASSINKTRPGKTGPGSGVSSSVVSGLALGSGEYFTRIGVGTPPRYVYMILDTGSDVVWLQCAPCENCYSQTDPVFDPKKSSSYAGISCLSPMCRRLDKPGCNGKKVCQYEVFYGDGSFTVGDFSTEMLTFGRTGVPRVAIGCGHDNEGLFNGSAGLFGLGRGGLSFPIQTAYRFRQKFSYCFVDRFVSNKPSSIVFGDLAIPRTVFFTPLIKNLNLPTFYYVELLGISVGGVPVRGISASLFRFDKTGDGGVIIDSGTSVTRLTRLAYVALRNAFRMGTRHLKQEPGNELLDTCYNLAGVKELKIPTVVLHFRGADMNLPSGNLLVPMDTDKKTYCFAFARTTSKLSIIGNIQQQGFRIAYDLAGSRIGFSPQGCV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00911 475 ProSiteProfiles Peptidase family A1 domain profile. 132 470 IPR033121 -
Tsu08g00911 475 Pfam Xylanase inhibitor C-terminal 319 470 IPR032799 -
Tsu08g00911 475 PANTHER ASPARTYL PROTEASES 21 474 IPR001461 GO:0004190|GO:0006508
Tsu08g00911 475 Pfam Xylanase inhibitor N-terminal 132 297 IPR032861 -
Tsu08g00911 475 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 21 474 - -
Tsu08g00911 475 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 147 158 IPR001969 GO:0004190|GO:0006508
Tsu08g00911 475 Gene3D Acid Proteases 298 475 IPR021109 -
Tsu08g00911 475 SUPERFAMILY Acid proteases 124 474 IPR021109 -
Tsu08g00911 475 Gene3D Acid Proteases 117 297 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00911 Tsu-Chr8 9998568 10000061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00911 122 474 Miscellaneous Gene Families AT1G77480 26.873 7.80e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00911 K22683 - gmx:100791511 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04693 07 51358660 51360873 Tsu08g00911 08 9998568 10000061 PCT