Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00594 ATGGAGAAATGGAATAAACCTTCAAGAGATCATAGAAAACATCATCAAAGAGAAAACCCATCTTTCTCTTCATCTCTTCTTGATGTAATTTATCGATCGATCGACGAAGGACATCATAAAACagaggaaaaagaagagaaactCATGTTTTACAAAGAAAtatcaacatcaaaatcaacaaCTACAACAactatgaggaagatgaagagtGTTGAAGATGAAAAATCAAACTTTAGAAAAACAAGAAAGGTTGAGAATTGGAATGGAAGAAACTCTTTGACAGAATTTGAAAGAGTAACAAGAAACAATTCAAACACACTTTCCATGCATTcaagttcatcttcttcagAATCAAGTTCAGCTGGTGGAttttcatcatctgattcagaatCATTCTATGGTTTACAAAAACCTAAACCAATTAGAACAAGTGTttctgaaaaacaaaacattggTTATAGCAGAAACCATAACTATAACTATAGCTATAACTATGACCATTCTGTTCAAACACAAAATCCCAAAAATGAGAATGGTTTTGGTAAAACAAAGTCTAAAGCTTTGAGAATTTTGTATGGTGATATGAAGAAATCAAAGCAACCCATTTCACCTGGTGCAAGACTTGCAAGTTTTTTGAATTCACTTTTCACTTCTAGTGGAAATACTAAAAAATCAAAGGTATCATCATCAGCTACGAAAACTACTACAAACTCTGTTTTGGAAGCAAAATCAGCACAAACTTCAACATGTTCATcagtttcttctttttcaagGTCTTGTTTAAGCAAAACACCTTCATCAAGATCAGGTGCTAAAAGATCAGTGAGATTTTGTCCTGTTAGTGTTATTGTTGATGAAGATTGTAGACCTTGTGGACACAAGAATTTGCATGAAGGTGAAAAGGGTTTGGTAGCTAATTCACTACTATATGATGggaaaagtaaaagtaaaagtAGTAGTGAGGAACTGAGGTTGCATGTGATGCAAGAAAGTAGAAGAGTTGAAGAATTAGCTAGAGATTTGTTGAAGAATtatcagaaaaaaaatgaagttgattttaatatgcaatttgaagatgaagatgatgatggagCTAGTTGTTCAAGTTCTGATTTATTTGAATTAGATAATTTATCAGTAATTGGGATTGAGAGGTATAGAGAAGAATTACCTGTGTATGAAACTACTCATTTCAATCCTAATAGGGTTATTGGAAATGGTTTCATTAtgtaa 1233 0.2701 MEKWNKPSRDHRKHHQRENPSFSSSLLDVIYRSIDEGHHKTEEKEEKLMFYKEISTSKSTTTTTMRKMKSVEDEKSNFRKTRKVENWNGRNSLTEFERVTRNNSNTLSMHSSSSSSESSSAGGFSSSDSESFYGLQKPKPIRTSVSEKQNIGYSRNHNYNYSYNYDHSVQTQNPKNENGFGKTKSKALRILYGDMKKSKQPISPGARLASFLNSLFTSSGNTKKSKVSSSATKTTTNSVLEAKSAQTSTCSSVSSFSRSCLSKTPSSRSGAKRSVRFCPVSVIVDEDCRPCGHKNLHEGEKGLVANSLLYDGKSKSKSSSEELRLHVMQESRRVEELARDLLKNYQKKNEVDFNMQFEDEDDDGASCSSSDLFELDNLSVIGIERYREELPVYETTHFNPNRVIGNGFIM 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00594 410 MobiDBLite consensus disorder prediction 56 151 - -
Tsu08g00594 410 MobiDBLite consensus disorder prediction 219 241 - -
Tsu08g00594 410 MobiDBLite consensus disorder prediction 1 26 - -
Tsu08g00594 410 MobiDBLite consensus disorder prediction 87 133 - -
Tsu08g00594 410 MobiDBLite consensus disorder prediction 67 86 - -
Tsu08g00594 410 PANTHER PROTEIN BIG GRAIN 1-LIKE A 11 410 - -
Tsu08g00594 410 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 11 410 IPR039621 GO:0009734
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00594 Tsu-Chr8 6457050 6458625 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00594 - - gmx:100798956 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04495 04 52675218 52676461 Tsu08g00594 08 6457050 6458625 ECH
Tsu08g00594 08 6457050 6458625 Tsu08g00594 08 6457050 6458625 ECH
Tsu08g00594 08 6457050 6458625 Tsu07g00783 07 6438875 6440209 ECH