Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04495 ATGCATAGCAAAGAGATCATTCTATCTCTTCCACAAAGGAGAAGAACTccttctttctcttccattctTCTCGACACTATCGATCATTCTATCGATGAATCGAAAACCGATTTTATTGACGATGTAAACCAACATCAACATCAGTATCTCTATAATCAAACCACCAAACATGTCAAATTCAATGAAAAAAGTGTCAATTCCAAACAGAGGATGAATCTTCGTCAAGCTGTGATGATAGAAGATTGGATGGAGAAGAATTCAAGTTCAAGCTCATCAGAATGTAGCTCTGGTGGAATCTTTTCTTCCTCAGAAACAGATTCATCTTACAAAAAACAAAGATCAAGAACCAAATACAATCTACCCCAGAAACATCATAGCAATTCagagaaacaacaacaacaacaacaacaaaaacagaacaagaacaagaaaaagGAGAAGCAGCAAGGTTGGGAAGATGGTTTTACAAGAACAAAGCTAAGAGCTTTGAAAATCTATGATGAACTGAATCAAAAAGTGAAACAACCCATTTCACCTGGGAGTAGAATAGCTACATTTCTTAGCTCTATTTTCAATTCTCACAATGTGAAGAAAGCTAAAATGTGTTACGTTGGTGCTGTTGAAGATGTTAGTTTTGATCATAAATCTAAGTCACCTTGTTTCTCTTCTTCAGTTTCTTCATTTTCTAGAAGATCTTGCATGAGCAAAACACCTTCAAAATCTAACAATGGTGTTAAAAGATCAGTGAGATTTTACCCTGTCAGTGTAATCCTAGGTGAGAATGATtctgaacaacaacaacaacagcaactaCAACAACCTAGTATTCGAAATGTTACGAGAAATTCTTCGGTTAAGGAGATGAAAAATACTATTAACAATGTTATTATGGCAAAAGAAAAAGGAGCTGTTAAGGGTGAGTTTGATTTTAGAAGATTTTACGATAACAAcggtgaagatgaagatgaagatgaagacgaTGATGATGCTTTGAGTTATTCGAGTTCGGATTTATTTGAGCTTGATCATCTGATTGGAGGTGAAAGGTATCAAGAAGAGCTTCCAGTTTATGAAACTACTAATTTAGAAACCAATAAGGCCATTGCTAATGGTTTGTGTTTGTAG 1125 0.3093 MHSKEIILSLPQRRRTPSFSSILLDTIDHSIDESKTDFIDDVNQHQHQYLYNQTTKHVKFNEKSVNSKQRMNLRQAVMIEDWMEKNSSSSSSECSSGGIFSSSETDSSYKKQRSRTKYNLPQKHHSNSEKQQQQQQQKQNKNKKKEKQQGWEDGFTRTKLRALKIYDELNQKVKQPISPGSRIATFLSSIFNSHNVKKAKMCYVGAVEDVSFDHKSKSPCFSSSVSSFSRRSCMSKTPSKSNNGVKRSVRFYPVSVILGENDSEQQQQQQLQQPSIRNVTRNSSVKEMKNTINNVIMAKEKGAVKGEFDFRRFYDNNGEDEDEDEDDDDALSYSSSDLFELDHLIGGERYQEELPVYETTNLETNKAIANGLCL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04495 374 MobiDBLite consensus disorder prediction 84 153 - -
Tsu04g04495 374 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 9 374 IPR039621 GO:0009734
Tsu04g04495 374 MobiDBLite consensus disorder prediction 139 153 - -
Tsu04g04495 374 MobiDBLite consensus disorder prediction 84 107 - -
Tsu04g04495 374 PANTHER PROTEIN BIG GRAIN 1-LIKE A 9 374 - -
Tsu04g04495 374 Coils Coil 126 149 - -
Tsu04g04495 374 MobiDBLite consensus disorder prediction 262 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04495 Tsu-Chr4 52675218 52676461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04495 - - mtr:MTR_4g125620 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04495 04 52675218 52676461 Tsu08g00594 08 6457050 6458625 ECH
Tsu04g04495 04 52675218 52676461 Tsu07g00783 07 6438875 6440209 ECH
Tsu04g04495 04 52675218 52676461 Tsu04g04495 04 52675218 52676461 ECH