Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00500 ATGAATATATTCTCTACTATTTGGTTATTGCCTCTCTTCACTTTTATTTATGTCAATGGTATTCTTCCAATCGAAGCTCTTCAGTCTTCTGATGATTTAACAGATCAACCTTATAGAACTGCTTATCATTTCCAACCTCCCAAGAATTGGATCAATgATCCTAATGGACCATTGCTTTACAAAGGATACTATCATCTATTCTATCAATACAATCCAAAAGGTGCGGTTTGGGGAAATATTGTGTGGGCACATTCTATTTCAACTGATCTTGTTAACTGGACCCCACTTGATCCAGCCATCTTTCCATCTCAACCGTCCGATGTAAATGGTTGTTGGTCAGGATCAGCTACAATATTACATGGTAACAAACCAGCTATTTTGTACACTggaattaataaatttaatcacCAAGTACAAAATATAGCATAccctaaaaatttaaatgacccTTTCCTTAGGGAATGGATTAAGTCACCAAAAAATGCATTAATGGAACCaactaatgaaaataaaattaatgcaaGTTCATTTAGAGATCCTACTACTGGTTGGTTAGGAAAAGATGGACATTGGAGAATACTTGTTGGtagcaaaaaaaatactagagGAATTGCAATTTTATATAGAAGTAAAGATTTTATTCATTGGAGTAAATCAAAACACCCTTTACATTCAGCTAAGGGTACTGGAATGTGGGAGTGTCCTGATTTTTTTCCAGTTTTGAAAATTGGTAAATTTGGTGTTGATACATCATTAAATAATGATCATGTTAGACATGTTTTGAAGGTTAGTTTAGATGATAAAAAACatgattattatttaattggGAGTTATAATGAAGATAAAGACAAATTTACCCCTGATCATGGGTTTGAAGAGGTTAGTAGTGAACATGTTTTGAGATATGATTATGGAAAATATTATGCTTCAAAAACTTTCTTTGATGTTGGGAAGAATAGAAGGATTTTGCTTGGTTGGGTTAATGAATCTTCAAGTGTTGCTGATGATATCAAGAAAGGATGGTCAGGAATTCATACAATTCCAAGGGCAATTTGGTTGCACAAGTCAGGAAAACAGTTGGTACAATGGCCAATTGTGGAAGTTGAGAAGCTACGAGTGAATCATGTTAACTGGCCCACTAAAGTTCTCAAGGGAGGTGAACTGTTGAAAATTAATGGCGTCACAGCAGCACAGGCTGATGTTGAAATTTCATTTGAAGTGAATAACATTGGAAAGGCTGAAGTTTTGGAAAAATGGACAGACCCTCAAATTCTATGTAGCCAAAGTTCATCAAGAAAGAATGGATTAGGACCTTTTGGTCTACTTGTTTTTGCTTCAAAGGGATTAAAAGAGTTCACATCAGTATTTTTCAGAATATTCAAATACCAACAAAAACCTTTGGTGCTCTTTTGTAGTGACCAAAGCAGATCTTCTTTGAATAAAGATAATGATTTGACCACTTATGGGACTTTTATTGATGTGGATATTCTTCATGAGAAGCTGTCATTGAGAACTTTGATTGATCACTCTGTGGTAGAGAGTTTTGGAGGAGAAGGGAGAGCATGCATCACATCCAGAATTTATCCTACACTGGCCATCAATGATAAAGCACTACTTTATGCTTTCAATAATGGAACTACTGATGTAAAGATCACAAGATTGAGTGCTTGGAGCATGAAGAAAGCACAATTAAATGGAAAATTATAA 1707 0.3327 MNIFSTIWLLPLFTFIYVNGILPIEALQSSDDLTDQPYRTAYHFQPPKNWINDPNGPLLYKGYYHLFYQYNPKGAVWGNIVWAHSISTDLVNWTPLDPAIFPSQPSDVNGCWSGSATILHGNKPAILYTGINKFNHQVQNIAYPKNLNDPFLREWIKSPKNALMEPTNENKINASSFRDPTTGWLGKDGHWRILVGSKKNTRGIAILYRSKDFIHWSKSKHPLHSAKGTGMWECPDFFPVLKIGKFGVDTSLNNDHVRHVLKVSLDDKKHDYYLIGSYNEDKDKFTPDHGFEEVSSEHVLRYDYGKYYASKTFFDVGKNRRILLGWVNESSSVADDIKKGWSGIHTIPRAIWLHKSGKQLVQWPIVEVEKLRVNHVNWPTKVLKGGELLKINGVTAAQADVEISFEVNNIGKAEVLEKWTDPQILCSQSSSRKNGLGPFGLLVFASKGLKEFTSVFFRIFKYQQKPLVLFCSDQSRSSLNKDNDLTTYGTFIDVDILHEKLSLRTLIDHSVVESFGGEGRACITSRIYPTLAINDKALLYAFNNGTTDVKITRLSAWSMKKAQLNGKL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00500 568 SUPERFAMILY Arabinanase/levansucrase/invertase 34 365 IPR023296 -
Tsu08g00500 568 CDD GH32_Fruct1-like 49 353 - -
Tsu08g00500 568 Gene3D - 375 559 - -
Tsu08g00500 568 ProSitePatterns Glycosyl hydrolases family 32 active site. 43 56 IPR018053 GO:0004553|GO:0005975
Tsu08g00500 568 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 4 565 - -
Tsu08g00500 568 SUPERFAMILY Concanavalin A-like lectins/glucanases 364 561 IPR013320 -
Tsu08g00500 568 PANTHER CELL-WALL INVERTASE 4 565 - -
Tsu08g00500 568 Pfam Glycosyl hydrolases family 32 C terminal 367 558 IPR013189 -
Tsu08g00500 568 Pfam Glycosyl hydrolases family 32 N-terminal domain 43 364 IPR013148 -
Tsu08g00500 568 Gene3D Glycosyl hydrolase domain; family 43 47 374 IPR023296 -
Tsu08g00500 568 SMART glyco_32 43 519 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00500 Tsu-Chr8 5163590 5173843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00500 58 565 Glycoside Hydrolase AT3G13790 64.990 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00500 K01193 - gmx:100776791 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05360 02 62157060 62160540 Tsu08g00500 08 5163590 5173843 PCT