Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00464 ATGGTTACTTCCACCACCATGACTACAACCTACGGCACAATCCCAACATCACCAACACCACCAAAACTCGAATACATAACACGTGGCAAACAAAGAATCAAAGCCGGCTTAGGAACTCGTCGACCATGGAAAACCATGTTCGATCTCCGGTCACTCGGTATCCCCACGAGTGGCCTACCGGAAGCAATTTCACGGATTCGTGTTAACATATCATACTTCCGCATGAACTACACTATGCTTGGTTGTTTTTCTACTTCCTTCGTGATCAACCGTGTCGCGGTTGTGGTTGTGGTGGCGCATGCTGCATTTAGGAAGACAGAGGATTTGTTCTTTGAGGAAGAAGAGGAAGTTATTGTTTCTGTTGCTTCTTGA 372 0.4624 MVTSTTMTTTYGTIPTSPTPPKLEYITRGKQRIKAGLGTRRPWKTMFDLRSLGIPTSGLPEAISRIRVNISYFRMNYTMLGCFSTSFVINRVAVVVVVAHAAFRKTEDLFFEEEEEVIVSVAS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00464 123 Pfam PRA1 family protein 37 85 IPR004895 -
Tsu08g00464 123 PANTHER PRA1 FAMILY PROTEIN 7 80 - -
Tsu08g00464 123 PANTHER PRA1 FAMILY PROTEIN 88 119 - -
Tsu08g00464 123 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 7 80 IPR004895 -
Tsu08g00464 123 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 88 119 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00464 Tsu-Chr8 4617656 4618219 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00464 K20359 - gmx:100789765 115.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00464 08 4617656 4618219 Tsu08g00464 08 4617656 4618219 ECH
Tsu02g05383 02 62402823 62403646 Tsu08g00464 08 4617656 4618219 PCT