Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05383 ATGACTACCTACGGAACAATCCCAACTTCCTCATCACCACCACCAACTAACCTCGAATTCATCTCACGCGCCAAAGATAGATTCAAAGCTGGTCTCGGTACTCGTCGTCCATGGAAACTCCTCTTCAATTTCCGATCATTCAATCTTCCAACAAGTTTCTCCGACGCAATCAACcgaatcaaaacaaacatcTCTTACTTCCAGATGAACTACGCTATGATACTTCTCGGAATCATCTTACTCAGTCTTCTATGGCATCCAATCTCACTCATCGTTTACCTCGTTCTCATGACTGCTTGGCTTTTTCTCTACTTTCTTCGTGATGAACCGCTTGTTGTATTTGGTAGACTTATCAGTGATCGTGTTATTCTTGTTCTTATGTTGATTCTCACTGTTGTTTTGCTTCTTTTCACCGGTGCTATTATTAATATACTTGTGGCTGTTTTGGTTGGTGTTGTTGTGGTTTTGCTTCATGCTGCTTTTAGAAATACTCATGATCTGGTtcttgatgaagaagaaggtgTTTCGTTTTCTCCACCTGGTGGTGCTACTGTTTCTTGA 561 0.3868 MTTYGTIPTSSSPPPTNLEFISRAKDRFKAGLGTRRPWKLLFNFRSFNLPTSFSDAINRIKTNISYFQMNYAMILLGIILLSLLWHPISLIVYLVLMTAWLFLYFLRDEPLVVFGRLISDRVILVLMLILTVVLLLFTGAIINILVAVLVGVVVVLLHAAFRNTHDLVLDEEEGVSFSPPGGATVS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05383 186 PANTHER PRA1 FAMILY PROTEIN F2 1 174 - -
Tsu02g05383 186 Pfam PRA1 family protein 32 172 IPR004895 -
Tsu02g05383 186 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 174 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05383 Tsu-Chr2 62402823 62403646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05383 K20359 - gmx:100788152 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05383 02 62402823 62403646 Tsu02g05383 02 62402823 62403646 ECH
Tsu02g05383 02 62402823 62403646 Tsu08g00464 08 4617656 4618219 PCT