Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00399 ATGGAGAAACTATATAGAAGATATTTTAATGTGATAGTTAGAGAAGATAAAGGTATGAGGCCTATTGTACTCAAATGTGGTTTGGCTTTGGCTCTAACTTTTGCTGGTTTTCTCTACTCTCACTTTAGAACAAAAAGGATCAAACCTTCCCCTAAAGGACACCTTTCAGGTCATGGGAGTGAAGCTAATTTGCGAGGTATTAGAGGTATTAGAGTATCATCAAGTTCTTCCAACATCCGCTCAGAAGGAAATAATTTTGATACCGAAGAAACATGCATCAACAAGGTGGTATGTAGAAGTTCTCCAATTGGCATCTCGCCAAGAATTaaacaaaatgaagaaaaagacGACGAACTCAATGATCCTCCTGTAGCATATGTAAGTCTTGAGAAAGATGATTATGAGCAAGAGATCAGAAAATTGAGGAACATGGTCATGATGCTTCAAGAGAGGGAAAGAAGTCTCGAGGTTCAACTTCTTGAATACTGTGGTCTAAGAGAGCAAGAAGCCGTCGTAATGGAGCTTCAAAACCGATTAAAGATAAGTAATATGGAGACGAAGATGTTCAATTTAAAAGTCGAGACATTGCAGTCGGAGAATAGGAGATTAGAGGCACAAGTTGCTGATCATGCAAAAATGCTTGCTGAACTCGAGGCTTCGAaaacaaaagtgaaatttttgaagaagaaaattagGTATGAAGCTGAACAGAATAAGGAGCATATCGTAAATCTTAAACAAAAAGTTTCCAAGTTGCAGGACCTTGAATCTAAAGCTGTTGCTAATGATCAAGAAATTCAAATGAAGTTGAAAAGGCTAAAGGATCTTGAAGATGAGGTCGAACAATGGAGGAAATCTAATTTGAGATTGGAGAAGGACAATTCGGAGTTAGCTAGAAGATTGGATTCTACTCAGATCCTTGCAAATTCTGTTCTAGAAGATCCAGAAGCAGATGCTCTAAGGGAAGAAAGTGACCGTCTCAAGCGAGAGAACGAGAGATTGATGAAAGAAGTTGAGCAACTACAAGCTGATAAATGCACAGATGTTGAAGAACTAGTCTatttaaggtggataaatgcTTGTTTGAGACATGAATCAAGAAATTTTCATCCTCCACCTGGTAAAACAGTTGCAAGGGACTTAAGTAAAAGTTTAAGTCCAGATTCTGAGAGGAAAGCTAAACAGCTTATACTTGAATATGCAAATAATGAAGGAAGAACTAGTTGCATTTCTGATGTTGATTCTGATCAATGGTCCTCCTCACAAGCTTCTTTTATGACAGATACCGATGAGTGTTCTCCTCTTGAAAACTCGTCCGATGCACGAGTCAACAACAACAGCTCCACAAACAAGTCGAAGATCTTTGGTAAACTTATGAAGCTGATGAGAGGCAAAGATAATCGCAGTAATATCAGTAGTAGAGTTCCATCTTTAGAAAAATATAGATCTAGAGAAGATAGCACAAACAATTCTCCATATGATATTGGAGCTTATAGGAGTGAGTATGGAACTCCTACCGAAACATCTCGACATTCTCTCGATCTCAACCGTACCTCGAGTTCAAAGGAAGATAATACTAATAGGAGAAATTCAGATGTTGGAAGCTCAAAGAATTGCAGTCCAGCAACAAGTGGTGCAGGAGATTTGAAAATTAGTTCTCATTCATTCTCCGAATCCTATAGCTCAGAGAAATCTAATTTGACCAAATATGCTGAAGCTTTAAAGAATTCTAGTTCTAGTGAAACTTCGAAACATGTTGTACGTAGAAGATCATCGTCATATAGTTCATTTTAA 1794 0.3662 MEKLYRRYFNVIVREDKGMRPIVLKCGLALALTFAGFLYSHFRTKRIKPSPKGHLSGHGSEANLRGIRGIRVSSSSSNIRSEGNNFDTEETCINKVVCRSSPIGISPRIKQNEEKDDELNDPPVAYVSLEKDDYEQEIRKLRNMVMMLQERERSLEVQLLEYCGLREQEAVVMELQNRLKISNMETKMFNLKVETLQSENRRLEAQVADHAKMLAELEASKTKVKFLKKKIRYEAEQNKEHIVNLKQKVSKLQDLESKAVANDQEIQMKLKRLKDLEDEVEQWRKSNLRLEKDNSELARRLDSTQILANSVLEDPEADALREESDRLKRENERLMKEVEQLQADKCTDVEELVYLRWINACLRHESRNFHPPPGKTVARDLSKSLSPDSERKAKQLILEYANNEGRTSCISDVDSDQWSSSQASFMTDTDECSPLENSSDARVNNNSSTNKSKIFGKLMKLMRGKDNRSNISSRVPSLEKYRSREDSTNNSPYDIGAYRSEYGTPTETSRHSLDLNRTSSSKEDNTNRRNSDVGSSKNCSPATSGAGDLKISSHSFSESYSSEKSNLTKYAEALKNSSSSETSKHVVRRRSSSYSSF 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00399 597 Coils Coil 124 158 - -
Tsu08g00399 597 Coils Coil 235 258 - -
Tsu08g00399 597 MobiDBLite consensus disorder prediction 420 451 - -
Tsu08g00399 597 MobiDBLite consensus disorder prediction 465 597 - -
Tsu08g00399 597 Coils Coil 165 220 - -
Tsu08g00399 597 MobiDBLite consensus disorder prediction 531 581 - -
Tsu08g00399 597 Coils Coil 266 300 - -
Tsu08g00399 597 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 7 597 - -
Tsu08g00399 597 Coils Coil 317 344 - -
Tsu08g00399 597 MobiDBLite consensus disorder prediction 516 530 - -
Tsu08g00399 597 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 7 597 IPR040265 -
Tsu08g00399 597 MobiDBLite consensus disorder prediction 370 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00399 Tsu-Chr8 3875429 3878385 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00399 - - gmx:100781632 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05406 02 62588987 62591652 Tsu08g00399 08 3875429 3878385 PCT