Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05406 ATGGTGATAATGATCAAGAAGGAGAAGGGTATGAAGCCTATTTTAGTCAATTTTGGTTTGGCTTTGGCTCTTTCTTTTGCTGGATTCATCTGCTCACGCCTCAGAATCACAAGAATCAATCACTCTTCTAACTCATCCACTTCAGGTCATGAAAGTGAAGTTAATTTAGGAGATGATTTGGGAGCAAAACTCAGTACTTCCAACATTGCTTCAGAGGAAGAAACACGCACCAACGAGTTGAGGAGTGAAAAttctcctattgatattctcaGTAACAGTAAACAAAATGGAGATAAAGATGAGTTCCTCCTACCTGAATTTGACGAGCTCGTTAAGGAGGTAAAGTTTGAAGTAGAGGCGCCAAGGTTAAAAGTAGGATCTTCTAGAGGATATACAGTTCCTGATAAGGATGACTATGAACAAGAGATAAGTCATCTCAGAAACATGGTTAGATTGCTTCAAGACAAGGAACAAAATCTTGAGTTTCAGTTGCTTGAGTACTGTGGTCTTAGAGAGCAAGAAACTGTTGTGATGGAGCTTCAAAATAGATTGAAGATAACTAATATGGAGGTAAAGATGTTCAATCTGAAGGCTAAAAACTTACAGTCTGAGAATCATAGATTAAAAGAACAGGTTGCCGATCATGCAAAGGTGTTGGCTGAGCTTGACACTGCAAAGGCGAAAATCGAATTGCTCAATAAGCAAATCAGGTTTGAAAGTGAACAGAATAAGGAACAGATCATTACTCTTCAACAAAGAGTGGCCAGGTTGCAAGACCAAGAGTGCAAAGATGCTGCTTGTGATCAAGATATTAAAGTAAAGCTGCAAAAGCTAAAGGTTCTTGAGTTGGAAGTAGAAGAGTTGAGGAAATCTAATTCAAGATTGCATATAGAGATTTCTGACTTGACTCGAAGATTCGATTCTACTCAGATCATTGCTAATGATGCAAACCGAGAAAGTGAGCGTCTTAGAAAAGAAAACGAGGACTTGATGAAGCAAATTGAGCAACTACAATCCGATCGATGTTCAGATCTTGAAGAATTAGTGTACATGCGGTGGATAAATGCTTGCTTACGATATGAGCTGCGAAATTATCAGCCTCCACACAGTAAAACAGTTGCAAAGGATTTGAATAAAAGCTTAAGCCCCAATTCTGAGAAGAAAGCCAAACAGCTTATACTTGAATATGCTGATGCTAATGGATCAGGGAGTATTGTGgactttgattttgatcaatGGTCCTCCTCACAAGCTTCTTCTATTACCGACTCTGGAGAGTATGATGATTTTTCTTCTGTTGATAATTCATCTGCTGCCAGAAGCAACACCAAATTTTTTAGCAAGCTTAAGAGACTGATGCAAGGAAAGGATAGTCGTCATCATGATAGTCGGGTTTCAACTAGATATCAAGAAGATATCAATTCTCCACGGCCGAGTACATCAACTGGAATTGATCGTAGAGCGTCCTTTGATTTCTCAACGTCGATGAGTGTGAAGGAAAGGGATAGGAGATATTCAAGTTTAAGTAGAGATGGTTCCTTACCAGGTGTTTTAGGCATAGAGAAATCCGATTTGGAGAAATATGCAGAAGCTCTAAAAAATTCTAGTGTGCATACTAAATATCAAAGACGTGGAAGATCAACATCATttagttag 1656 0.3786 MVIMIKKEKGMKPILVNFGLALALSFAGFICSRLRITRINHSSNSSTSGHESEVNLGDDLGAKLSTSNIASEEETRTNELRSENSPIDILSNSKQNGDKDEFLLPEFDELVKEVKFEVEAPRLKVGSSRGYTVPDKDDYEQEISHLRNMVRLLQDKEQNLEFQLLEYCGLREQETVVMELQNRLKITNMEVKMFNLKAKNLQSENHRLKEQVADHAKVLAELDTAKAKIELLNKQIRFESEQNKEQIITLQQRVARLQDQECKDAACDQDIKVKLQKLKVLELEVEELRKSNSRLHIEISDLTRRFDSTQIIANDANRESERLRKENEDLMKQIEQLQSDRCSDLEELVYMRWINACLRYELRNYQPPHSKTVAKDLNKSLSPNSEKKAKQLILEYADANGSGSIVDFDFDQWSSSQASSITDSGEYDDFSSVDNSSAARSNTKFFSKLKRLMQGKDSRHHDSRVSTRYQEDINSPRPSTSTGIDRRASFDFSTSMSVKERDRRYSSLSRDGSLPGVLGIEKSDLEKYAEALKNSSVHTKYQRRGRSTSFS 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05406 551 MobiDBLite consensus disorder prediction 452 468 - -
Tsu02g05406 551 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 4 499 IPR040265 -
Tsu02g05406 551 Coils Coil 136 156 - -
Tsu02g05406 551 PANTHER ACTIN BINDING PROTEIN FAMILY 4 499 - -
Tsu02g05406 551 Coils Coil 313 340 - -
Tsu02g05406 551 MobiDBLite consensus disorder prediction 452 486 - -
Tsu02g05406 551 MobiDBLite consensus disorder prediction 67 93 - -
Tsu02g05406 551 MobiDBLite consensus disorder prediction 469 486 - -
Tsu02g05406 551 Coils Coil 170 260 - -
Tsu02g05406 551 MobiDBLite consensus disorder prediction 532 551 - -
Tsu02g05406 551 MobiDBLite consensus disorder prediction 535 551 - -
Tsu02g05406 551 Coils Coil 271 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05406 Tsu-Chr2 62588987 62591652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05406 - - gmx:100819899 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05406 02 62588987 62591652 Tsu02g05406 02 62588987 62591652 ECH
Tsu02g05406 02 62588987 62591652 Tsu08g00399 08 3875429 3878385 PCT