Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00382 atgaaacagGTAAGAGGTGAAATTACTTACAATGGACACAAACTTAATGAATTTGAACCAAGAAAAACTTCAGCATATATTAGCCAAAATGATGTTCATGTTGGTGAAATGACTGTTAAAGAAACTTTGGATTTCTCAGCTAGATGCCAAGGAGTTGGAACTAGATATGATCTATTAAGTGAGCTTGCTAGAAGGGAAAAGGAAGCTGGTATATTTCCAGAGGCAGATCTTGACCTTTTCATGAAgGCTACAGCAGTGAAAGGAACAGAAAGCAGTCTAATTACCGACTATACTCTAAAAATATTGGGACTTGATATTTGTAAGGACACCATTGTAGGAGATGAAATGCATAGAGGTGTTTCTGGAGGCCAAAAGAAACGTGTGACCACAGGTGAAATGATTGTTGGGCCAACAAAAACACTATTCATGGATGAAATATCAACTGGTCTTGATAGTTCAACAACATTTCAAATTGTGAAATGTTTGCAACAAATTGTGCACCTTAGTGAAGGAACAATTTTAATGTCACTTCTTCAACCAGCTCCTGAGACGTTCGATCTATTTGATGATATCATTCTTATATCTGAGGGTCAAGTTGTATACCAAGGTCCACGTGACCATATTGTGGAATTCTTTGAATCCTGTGGATTCCGTTGTCCTGAAAGAAAGGGAACCGCTGATTTCTTGCAAGAGGTTACATCAAGAAAGGACCAAGAACAATACTGGGCAGACAAAAATAGACCATACAGATATGTTTCTGTGACAGAATTTacaaacaaattcaaacaattccATGTTGGAGTACGTCTCGAACAAGAGTTATCGGTTCCATTCGACAAATCAAGTGCACACAAAGCAGCTCTTGTTTACAGCAAAAACTCAGTTCCAACAAGGGACATTTTTAGAGCATGTTGGGACAAAGAATGGTTACTTATCAAAAGAAACTCTTTTGTCTACATATTCAAGACAGCACAAATTGTTATCATTGCCATCATATCAGCAACTGTTTTCTTGAGAACTGAAATGAGTAGAGATAATGAAGATGATGCTGCACTTTACATTGGTGCAATTTTGTTTGCTATGATCATGAATATGTTCAATGGTTTTGCTGAACTCGCGCTTACTATTGGAAGACTTCCTGTGTTTTATAAACATAGAGATCATCTTTTCCATCCTGCTTGGACTTACACACTCCCCAATTTCTTGTTGCGTATTCCGATTTCTATGTTTGAGTCTCTTGCTTGGATGGTTGTTACTTACTACACCATTGGATTCGCTCCTGAAGCCAGCAGGTTCTTTAAGCAATTTTTGTTGGTGTTCCTTATCCAACAAATGGCAGCTGGGATGTTTAGATTCATTGCTGGAGTATGTAGGACAATGATTATTGCAAACACTGGTGGTGCACTCATGCTTCTTGTTGTTTTTCTACTTGGTGGTTTCATCCTTCCTAAACGTTCAATTCCTAACTGGTGGGTTTGGGCTAATTGGGTTTCACCATTGACATATGCTTTCCATGCTATGTCTGTGAATGAAATGTATGCTCCAAGGTGGATGCATAATGGGACTTCTTCGGATAAAACTACTACATTGGGTCTGTCTGTTTTAAAGAACTTTGATGTTTATGCCAACGAAAATTGGTATTGGATAGGTGTTGGAGCTCTTGCGGTTTTCACAGTTTTCTACAATGTTCTCTTCACCATTTCACTTATGTACCTAAGTCCTATGGGAAAGAAGCAAGCAATTATAACTGAGGAAGATGCAAATGAATTGGAGAATGAAGGAGACGTAAACGAACCAAGACTCGTGAGGCCACCTTCCAACCGAGAGTCAATGCTTCGATCTCTATCTAAAGCCGATGGAAACAATTCAAGGGAAGTGGCAATGCAAAGAATGAGTAGCCAAGCTAATCCAAATGGATTAAGAAATGCTGACGCAGACACTTCAAATGCACCAAGAAGAGGAATGATTCTACCTTTTCAACCACTTGCAATGTCCTTTGACAGTGTTAATTACTTTGTAGACATGCCTGCAGAAATGAAAGAGCAAGGAGTGACAGAAGATAGGTTACAATTGCTTAGGGAAGTAACCGGTTCATTTAGGCCTGGAGTTCTTACTGCACTAATGGGAGTTAGTGGCGCCGGGAAGACAACTTTAATGGATGTTTTAGCTGGAAGAAAAACTGGTGGCTACATCGAAGGAGATGTTAGAATCTCTGGATACCCTAAGAACCAAGAAACCTTTGCAAGAGTTTCTGGTTACTGTGAACAAACTGATATTCATTCACCTCAAGTTACTATCAGAGAATCATTGCTTTACTCGGCTTTCCTTCGGCTACCGAAAGAAGTTGGTGATCAGGAAAAGATACAATTTGTGGAACAAGTGATGGATTTGGTAGAGCTGCAAAGTCTTAAGGATGCTATTGTTGGGCTACCAGGAGTTACAGGGTTGTCAACTGAACAAAGAAAGAGGCTGACAATTGCGGTCGAGCTTGTTGCTAATCCTTCAATCATATTCATGGATGAACCAACTTCAGGTCTAGATGCAAGAGCTGCTGCTATTGTTATGAGGACCGTAAGAAACACTGTTGATACCGGAAGAACAGTTGTGTGCACAATTCATCAGCCTAGCATTGATATCTTCGAAGCCTTTGATGAGCTCATATTGATGAAAAGAGGAGGGCAACTGATCTACGGAGGACCTTTAGGTCGGAATTCACACAAGATTATCGAATACTTTGAGGCAATCCAAGGTGTCCCAAAAATCAAGGACATGTACAATCCTGCAACATGGATGCTTGAAGTTAGCTCCGTAGCCGCTGAAGTCCGACTTGGAATGGACTTTGCTGAATACTACAAGTCATCAGATTTGTTTAGGAGAAGCAAAGCTCTTGTAACCGAGTTAAGTACACCGCCACCGGGAACTAGTGATTTGTTTTTCGCTACTAAGTACTCCCAATCAACAATTGGACAATTCAATTCTTGTCTTTGGAAGCAGTGGCTGACATATTGGAGGAGTCCAGATTACAATCTAGTCAGATACTTCTTCACCTTGGCTTGTGCTCTCATGATAGGGACAGTATTTTGGAGAGTTGGAAAACACAAGGAGAATTCGACTGATCTTACACTGATTATAGGAGCAATGTATGCTGCTGTTCTTTTTGTTGGAATTAACAATTGTCAAACAGTTCAACCAATTGTCGCCATTGAAAGAACCGTGTTTTATAGAGAAAGAGCTGCTGGAATGTATGCTCCTTTGCCTTATGCCTTAGCACAGATTTTGATAGAAGTACCATTTGTGCTATTTCAAACATTATATTACTCACTCATTGTGTATGCTATGGTGGCCTTTCCATGGAAAGTAGAAAAGTTCTTTTGGTTCGTCTTTGTCAGCTTCTTCTCCTTCCTATACTTCACATACTACGGAATGATGACTGTTTCCATCACACCAAACCATCAAGTTGCATCAATCTTTGCAGCAGCATTCTACGGACTCTTTAACCTCTTCTCTGGTTTCTTCATCCCAAGACCTAAAATTCCAGGATGGTGGGTATGGTACTACTGGATTTGTCCAGTTGCATGGACAGTGTATGGATTAATTGTGTCTCAATATAGAGACATAGATGATCCTATTACTGTTTTTGGATCTACTCAAAACTTCACTGTGAAAGGATACATCGAACATCATTATGGATTCAAACCTGATTTCATGGGACCAGTTGCTGCAGTTTTGGTTGGTTTCACTTGCTTCTTTGCCTTTATATTTGCCTACTGCATCAGGACATTGAACTTCCAATCAAGATAA 3801 0.3949 MKQVRGEITYNGHKLNEFEPRKTSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLSELARREKEAGIFPEADLDLFMKATAVKGTESSLITDYTLKILGLDICKDTIVGDEMHRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLSEGTILMSLLQPAPETFDLFDDIILISEGQVVYQGPRDHIVEFFESCGFRCPERKGTADFLQEVTSRKDQEQYWADKNRPYRYVSVTEFTNKFKQFHVGVRLEQELSVPFDKSSAHKAALVYSKNSVPTRDIFRACWDKEWLLIKRNSFVYIFKTAQIVIIAIISATVFLRTEMSRDNEDDAALYIGAILFAMIMNMFNGFAELALTIGRLPVFYKHRDHLFHPAWTYTLPNFLLRIPISMFESLAWMVVTYYTIGFAPEASRFFKQFLLVFLIQQMAAGMFRFIAGVCRTMIIANTGGALMLLVVFLLGGFILPKRSIPNWWVWANWVSPLTYAFHAMSVNEMYAPRWMHNGTSSDKTTTLGLSVLKNFDVYANENWYWIGVGALAVFTVFYNVLFTISLMYLSPMGKKQAIITEEDANELENEGDVNEPRLVRPPSNRESMLRSLSKADGNNSREVAMQRMSSQANPNGLRNADADTSNAPRRGMILPFQPLAMSFDSVNYFVDMPAEMKEQGVTEDRLQLLREVTGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGYPKNQETFARVSGYCEQTDIHSPQVTIRESLLYSAFLRLPKEVGDQEKIQFVEQVMDLVELQSLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELILMKRGGQLIYGGPLGRNSHKIIEYFEAIQGVPKIKDMYNPATWMLEVSSVAAEVRLGMDFAEYYKSSDLFRRSKALVTELSTPPPGTSDLFFATKYSQSTIGQFNSCLWKQWLTYWRSPDYNLVRYFFTLACALMIGTVFWRVGKHKENSTDLTLIIGAMYAAVLFVGINNCQTVQPIVAIERTVFYRERAAGMYAPLPYALAQILIEVPFVLFQTLYYSLIVYAMVAFPWKVEKFFWFVFVSFFSFLYFTYYGMMTVSITPNHQVASIFAAAFYGLFNLFSGFFIPRPKIPGWWVWYYWICPVAWTVYGLIVSQYRDIDDPITVFGSTQNFTVKGYIEHHYGFKPDFMGPVAAVLVGFTCFFAFIFAYCIRTLNFQSR 1266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00382 1266 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1266 - -
Tsu08g00382 1266 MobiDBLite consensus disorder prediction 588 649 - -
Tsu08g00382 1266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 685 900 IPR027417 -
Tsu08g00382 1266 Pfam ABC transporter 692 844 IPR003439 GO:0005524
Tsu08g00382 1266 Pfam ABC-2 type transporter 990 1203 IPR013525 GO:0016020|GO:0140359
Tsu08g00382 1266 Pfam ABC-2 type transporter 301 511 IPR013525 GO:0016020|GO:0140359
Tsu08g00382 1266 MobiDBLite consensus disorder prediction 609 645 - -
Tsu08g00382 1266 Pfam ABC-2 type transporter 873 933 IPR043926 GO:0140359
Tsu08g00382 1266 Pfam ABC-2 type transporter 179 232 IPR043926 GO:0140359
Tsu08g00382 1266 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 1266 - -
Tsu08g00382 1266 CDD ABCG_PDR_domain2 661 899 IPR034003 -
Tsu08g00382 1266 Gene3D - 1 215 IPR027417 -
Tsu08g00382 1266 Gene3D - 678 911 IPR027417 -
Tsu08g00382 1266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 221 IPR027417 -
Tsu08g00382 1266 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 664 916 IPR003439 GO:0005524
Tsu08g00382 1266 SMART AAA_5 701 893 IPR003593 -
Tsu08g00382 1266 Pfam ABC transporter 4 146 IPR003439 GO:0005524
Tsu08g00382 1266 Pfam Plant PDR ABC transporter associated 517 582 IPR013581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00382 Tsu-Chr8 3723603 3736017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00382 K08711 - gmx:100798588 2239.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00382 08 3723603 3736017 Tsu08g00382 08 3723603 3736017 ECH
Tsu02g05423 02 62752696 62765473 Tsu08g00382 08 3723603 3736017 PCT