Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05423 ATGGATGGGAGTTTAAGTAGAAGCATAAGTAGGAGTTTAAGTAGGTCAAGTTGGAGAATGGAAGAAGTGTTTGCTAGTGGAAGATATTCTAGAAGAACTTCTaatgttgatgaagatgaagaagcacTTAAATGGGCTGCAATAGAGAAATTGCCAACTTATGATAGGCTAAGAACAAGTATCCTTCAAACATATGCAGAAGAATATGGTGATGAAGATCATCCAAATAGAGTGCAACATAAGGAAGTTGATGTTAGAAAGCTAGATgtcaatgaaaaacaaaaatttattgataaaatCTTCAAGGTTGCTGAAGAAGATAATGAAAAGTATTTGAGAAAATTCAGAAACAGAATTGATAAGGTTGGTATTCGACTCCCAACAGTAGAAGTGAGGTTTGAAAATCTTAGTATTGAGGCAGATTCTTATGTTGGAAGCAGAGCTTTACCAACCTTACCAAATGTTTCATTGAATATGCTTGAATCAGCTCTACGTATTATTGGTATTAGTactacaaagaaaacaaaactcAATATTCTTAAAAATGTATCTGGCATTATTAAACCTTCTAGGATGACCCTTTTGCTAGGTCCTCCATCATCAGGGAAAACCACCCTTTTGCTAGCTTTGGCTGGAAAACTTGACACTGACTTAAGGGTAGAAGGAGAAATCTCTTACAATGGATACAAACTGAATGAGTTTGTCCCTAGAAAGACTTCAGCATATATTAGCCAAAATGATGTACATTTGGGAGTAATGACTGTAAAAGAAACATTGGATTTTTCAGCTAGATGCCAAGGAGTTGGGACACGATATgATCTATTGTCTGAACTTGCTCGAAGGGAAAAGGATGCCGGCATATTTCCTGAGGCAGAACTAGACCTTTTCATGAagGCAACTGCAATGGAAGGAACCGAAAGCAGTCTCATTACCGATTATACACTCAAAATACTGGGACTTGATATATGCAAAGATACCATTGTAGGTGATGAAATGCAGAGAGGCATATCTGGTGGCCAAAAGAAACGTGTAACAACAGGTGAGATGATTGTTGGACCTACAAAAACACTTTTTATGGATGAGATATCAACTGGTCTTGATAGTTCCACAACATATCAGATAGTGAAATGTTTCCAACAAATTGTACACCTCACTGAAGCAACCATATTCATGTCCTTACTTCAACCTGCTCCTGAGACATTTGATCTATTTGATGATATTGTCCTAATATCAGAGGGTCAAATAGTTTATCAAGGCTCACGTGAACATGTCATTGAATTCTTTGAATCTTGTGGCTTTAAATGTCCTGACAGAAAAGGAACTGCAGATTTCTTGCAAGAGGTTACATCAAGGAAAGATCAAGAACAATATTGGTCGAATAGAAACATACCATACCGTTATATAACAGTAACAGAATTTGCAAACAGATTCAAACAATTCCACATTGGAGCACAGCTTCAAAATGAACTATCTATCCCATTTGACAAATCATCAGGACATAGAGCATCTCTTGTTTTCATGAAATACACAGTTCCTACAATGGCACTTTTAAAAGCATGTTGGGACAAAGAATGGCTTTTAATAAAGAGAAACTCATTTGTTTACATATTCAAAACAGTTCAAATATGCATTGTTGCTATCATATCAGGAACTGTTTTTATAAGAACTAAAATGCATAGAAGAAATGAGGGTGATGCTGCTGTTTATATTGGTGCTATTTTGTTTACCATGATCATGAATATGTTCAATGGTTTTTCTGAGATGCCACTTACTATTGCAAGGCTTCCTGTGTTCTACAAGCATAGAGATCATCTTTTTCATCCTCCATGGACTTATACacttccaaatttttttctaaagattcCTATTTCCATTTTTGAGGCTATTGTTTGGGTTCTTATTACATATTATACTATTGGATTTGCACCAGAAGCTAGCAGGTTCTTCAAGCATTTGTTGTTGGTGTTTCTTGTTCAACAAATGGCAGCTGGGATGTTTAGGGTAATATCTGGAGTTTGTAGGTCAATGATTATTGCCAACACTGGTGGAGCCCTCATGCTTCTTCTTGTTTTCTTACTTGGAGGTTTCATCCTACCTAAACGTGACATTCCAAATTGGTGGGTGTGGGGCTATTGGATTTCTCCATTGTCATATGCTTTCAATGCCTTTTCTGTGAATGAAATGTTTGCTCCAAGGTGGAGTAAACCGTCTTCAGATGGTTTAAATTCATTAGGTGTAGCCACATTGAATAACTTTGATGTTTATGCTGAAAAATATTGGTACTGGATAGGTGTAGCAGCTCTTCTTGGTTTCACTATTTTATACAATGTTCTGTTCACTCTTGCACTTATGTACCTTAATCCTGTTGGAAAGAAACAAGCAATTATATCAGAAGAAGAAGCAAGTGAAATGGAAGCCGGAGGTGATTCCAAGGAGGAACCTAGACTTGTAAGGAAGGAGTCCAACAAAGGAAATAGCACAAGAGAAGTAGCAATGCAGAGAATGGGAAGTAGAGGTAATCCAAGTTCAACACTTGAGTCAGCCAATGGAGTTGCTCCAAAGAGAGGAATGGTTCTTCCTTTTCAACCACTTGCAATGTCTTTTGATAGTGTTAATTACTATGTAGACATGCCAGCAGAAATGAAAGAGCAAGGAGTATCAGAAAATAGGTTACAATTGCTTAGAGAAGTAACTGGTGCATTTAGGCCTGGCGTTCTAACCGCTTTAATGGGAGTTAGTGGAGCTGGAAAGACAACTTTGATGGATGTTTTAGCTGGAAGGAAGACAGGTGGTTACATTGAAGGAGATGTTAGAATTTCTGGCTTCCCTAAGAACCAAGAAACCTTTGCTAGAATCTCTGGATACTGCGAACAAACTGATATCCATTCACCCCAAGTTACTGTCAGAGAATCCGTTATTTACTCGGCTTTCCTTCGATTACCTAGAGAAGTCAACAATGAGGAAAAAATGAAATTTGTGGATGAAGTAATGGATTTGGTGGAGTTGGATAATCTTAGGGATGCTATAGTTGGCCTTCCAGGTGTTACAGGGTTGTCAACCGAACAACGAAAAAGGCTAACAATAGCCGTTGAGCTTGTTGCTAATCCTTCAATCATTTTCATGGATGAACCAacttcaggtcttgatgcaAGAGCAGCAGCAATTGTTATGAGGACAGTGAGAAACACTGTTGACACTGGAAGAACAGTTGTCTGCACAATTCACCAGCCTAGTATTGATATCTTTGAAGCCTTCGACGAGcTGCTTTTGATGAAGAGAGGAGGACAAGTGATCTACTCAGGACCATTAGGAAGAAATTCACACAAGATTATAGAATATTTTGAGGCAATTCCAGGGGTCACAAAAATTAAGGATAAGTATAATCCAGCTACATGGATGTTAGAGGTAAGCTCTATAGCAGCTGAAGCTAGACTTGCAATGGACTTTGCTGAATACTACAAAACCTCAACATTGCATCAGAGAAACAAAGCTCTTGTAAGTGAGTTAAGTACTCCTCCACCCGGAGCAAAAGATGTATATTTCACCACTCAATATTCTCAGTCAACATGGGGACAATTCAAATCATGTCTATGGAAACAATGGTTGACTTATTGGAGAAGTCCAGATTACAATCTTGTTAGATATTTCTTCACATTGGCTGCAGCTCTCATGGTGGGAACAGTCTTTTGGAAAGCTGGCAAGAAAAGGCATAGCTCGGCTGATTTGAACACGATTATAGGAGCATTATATGGTTCTGTATTTTTTGTCGGTGTCAACAATTGTCAAACTGTTCAACCAGTAGTAGCTATTGAAAGAACTGTTTTCTATAGAGAAAGAGCTGCCGGAATGTATTCTGCTTTACCTTATGCCATTGCTCAGGTTGTTTGTGAAATACCATATGTGTTTTTCGAAACTATATATTTCGCATTCATAGTGTATGCTATGGTAGGCTTTGAATGGAAAGTGGAGAAGGTGTGTTGGTTCTTCTTTGTGAGCTTCTTTTCCTTCTTGTACTTCACATATTATGGGATGATGACAGTTTCCATTACACCAAACCACCAAGTAGCAGCAATCTTTGGAGCAGCTTTCTATGGACTCTTTAATCTCTTTTCTGGTTTCTTTATCCCAAGACCAAAAATTCCTAAATGGTGGATTTGGTATTATTGGATTTGTCCAGTAGCATGGACAGTGTATGGATTAATTGTGTCACAATATAGAGATGTGACAATAGGCATAAGTGTGCCTGGTGTGAGTGCAAAAATTCCCATCAATGAATACATTGAAGAACATTATGGATTCAAACCAGATTTCATGGGGCCAGTTTCTGCTGTTTTGGTTGGTTTCACTGtattttttgcatttatatttgcCTTCTGCATCAAGGCACTGAATTTCCAAAccagataa 4407 0.3687 MDGSLSRSISRSLSRSSWRMEEVFASGRYSRRTSNVDEDEEALKWAAIEKLPTYDRLRTSILQTYAEEYGDEDHPNRVQHKEVDVRKLDVNEKQKFIDKIFKVAEEDNEKYLRKFRNRIDKVGIRLPTVEVRFENLSIEADSYVGSRALPTLPNVSLNMLESALRIIGISTTKKTKLNILKNVSGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDTDLRVEGEISYNGYKLNEFVPRKTSAYISQNDVHLGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAELDLFMKATAMEGTESSLITDYTLKILGLDICKDTIVGDEMQRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCFQQIVHLTEATIFMSLLQPAPETFDLFDDIVLISEGQIVYQGSREHVIEFFESCGFKCPDRKGTADFLQEVTSRKDQEQYWSNRNIPYRYITVTEFANRFKQFHIGAQLQNELSIPFDKSSGHRASLVFMKYTVPTMALLKACWDKEWLLIKRNSFVYIFKTVQICIVAIISGTVFIRTKMHRRNEGDAAVYIGAILFTMIMNMFNGFSEMPLTIARLPVFYKHRDHLFHPPWTYTLPNFFLKIPISIFEAIVWVLITYYTIGFAPEASRFFKHLLLVFLVQQMAAGMFRVISGVCRSMIIANTGGALMLLLVFLLGGFILPKRDIPNWWVWGYWISPLSYAFNAFSVNEMFAPRWSKPSSDGLNSLGVATLNNFDVYAEKYWYWIGVAALLGFTILYNVLFTLALMYLNPVGKKQAIISEEEASEMEAGGDSKEEPRLVRKESNKGNSTREVAMQRMGSRGNPSSTLESANGVAPKRGMVLPFQPLAMSFDSVNYYVDMPAEMKEQGVSENRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGFPKNQETFARISGYCEQTDIHSPQVTVRESVIYSAFLRLPREVNNEEKMKFVDEVMDLVELDNLRDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVTKIKDKYNPATWMLEVSSIAAEARLAMDFAEYYKTSTLHQRNKALVSELSTPPPGAKDVYFTTQYSQSTWGQFKSCLWKQWLTYWRSPDYNLVRYFFTLAAALMVGTVFWKAGKKRHSSADLNTIIGALYGSVFFVGVNNCQTVQPVVAIERTVFYRERAAGMYSALPYAIAQVVCEIPYVFFETIYFAFIVYAMVGFEWKVEKVCWFFFVSFFSFLYFTYYGMMTVSITPNHQVAAIFGAAFYGLFNLFSGFFIPRPKIPKWWIWYYWICPVAWTVYGLIVSQYRDVTIGISVPGVSAKIPINEYIEEHYGFKPDFMGPVSAVLVGFTVFFAFIFAFCIKALNFQTR 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05423 1468 Pfam Plant PDR ABC transporter associated 733 796 IPR013581 -
Tsu02g05423 1468 MobiDBLite consensus disorder prediction 807 825 - -
Tsu02g05423 1468 CDD ABCG_PDR_domain1 166 419 IPR034001 -
Tsu02g05423 1468 Pfam ABC-2 type transporter 1192 1405 IPR013525 GO:0016020|GO:0140359
Tsu02g05423 1468 Pfam ABC-2 type transporter 516 727 IPR013525 GO:0016020|GO:0140359
Tsu02g05423 1468 SMART AAA_5 189 414 IPR003593 -
Tsu02g05423 1468 SMART AAA_5 903 1095 IPR003593 -
Tsu02g05423 1468 Pfam ABC-2 type transporter 1075 1136 IPR043926 GO:0140359
Tsu02g05423 1468 Pfam ABC-2 type transporter 395 473 IPR043926 GO:0140359
Tsu02g05423 1468 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1468 - -
Tsu02g05423 1468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 164 437 IPR003439 GO:0005524
Tsu02g05423 1468 Pfam ABC transporter 180 362 IPR003439 GO:0005524
Tsu02g05423 1468 MobiDBLite consensus disorder prediction 826 849 - -
Tsu02g05423 1468 Gene3D - 880 1113 IPR027417 -
Tsu02g05423 1468 Pfam ABC-transporter N-terminal 87 155 IPR029481 -
Tsu02g05423 1468 Gene3D - 164 469 IPR027417 -
Tsu02g05423 1468 Pfam ABC transporter 894 1046 IPR003439 GO:0005524
Tsu02g05423 1468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 866 1119 IPR003439 GO:0005524
Tsu02g05423 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 887 1103 IPR027417 -
Tsu02g05423 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 436 IPR027417 -
Tsu02g05423 1468 MobiDBLite consensus disorder prediction 800 849 - -
Tsu02g05423 1468 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 9 1468 - -
Tsu02g05423 1468 CDD ABCG_PDR_domain2 863 1101 IPR034003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05423 Tsu-Chr2 62752696 62765473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05423 K08711 - gmx:100801386 2491.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05423 02 62752696 62765473 Tsu02g05423 02 62752696 62765473 ECH
Tsu02g05423 02 62752696 62765473 Tsu08g00382 08 3723603 3736017 PCT