Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00371 atggaaaacaaTGTACCAATAATAACTAAGAGAGTATGGAGCATGATACGTGTGGCCTTGTTCATGTTAAGAAAAGGCATATCAAAGGGAAAATTGATGATGGATCTCAACATGATGGTCAAACGCCGCAGTAAGCTTGCCGGAAAAGCTATCACCAACCTCATGTTCCACCATGGTGGCTCCACCTCAAGCCGTCGTTCCCACGTAGACACACACCTCTCTGGCACGAGGGAGTATGAGTTTAGCTGTAGCAACACACCAAATTACAAATTTGCCCTTAACAACAAGCGTCATCGCAACAACAATTTCTTTACGTGTGCACACGCTCCTCTCACACAAGACGAAGACATTGTAACTGTTAATGCGGTTAAGGCTGTGTTGGAGaatatgataaataataatgaagtgATAGTGGAGGCTTCCCCGGCGCTTCCCGGGTTTGGACGGACACCTAAGGTGAGGCAGTTGAGGGTGACCGACTCGCCCTTCCCATTGAATGACACAGACACGGACGCCGAGGTGGACAAGGCTGCCGATGCTTTCATAAAGAGGTTCTACACTCAGTTGAGGAAGCAAGATTGA 582 0.457 MENNVPIITKRVWSMIRVALFMLRKGISKGKLMMDLNMMVKRRSKLAGKAITNLMFHHGGSTSSRRSHVDTHLSGTREYEFSCSNTPNYKFALNNKRHRNNNFFTCAHAPLTQDEDIVTVNAVKAVLENMINNNEVIVEASPALPGFGRTPKVRQLRVTDSPFPLNDTDTDAEVDKAADAFIKRFYTQLRKQD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00371 193 Pfam Cotton fibre expressed protein 171 192 IPR008480 -
Tsu08g00371 193 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 192 - -
Tsu08g00371 193 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00371 Tsu-Chr8 3616036 3616707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00371 - - gmx:100802625 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05430 02 62820300 62820897 Tsu08g00371 08 3616036 3616707 PCT