Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05430 ATGTCAAAGGGCAAACTAATGATGGGCCTAAACATGATGCTCAAACGCCGTGGAAAGCTCGCCGGAAAAGCCATTgccaatttaatgttccaccatcACAGCCACCACAACAATGGTGGCTCTACCTCAAGCCGCCGCTCTCACGATTCACACCACCAATTCACTGCTTCAAAGGAGTATGAATTTAGCTGCAGCAACACTCCCCACCACTTCTTCCCAATAGGGAAGCGTCACCGCAGTCACAACAATTTTTTCACTTGCGCTCACGTGCCACCTACGCAGGATGATGATATGGCAACAATGAGCGCAATGAAGGCCGTACTAGAGATGCTTAACAAAGACCAAACGATTGTAGAAGCATCTCCAGCACTGCCTGGATTCGGGCGGAGCCCAATGGTGAGGCAATTGAGAGTGACGGACTCGCCATTTCCTTTAAAAGAAGATGATGAGAAGGACAATCAAGTTGATAAGGCTGCTGAAGATTTCATAAACAGGTTTTACAGCCAATTGAGGAAGCAAGAAtga 525 0.4552 MSKGKLMMGLNMMLKRRGKLAGKAIANLMFHHHSHHNNGGSTSSRRSHDSHHQFTASKEYEFSCSNTPHHFFPIGKRHRSHNNFFTCAHVPPTQDDDMATMSAMKAVLEMLNKDQTIVEASPALPGFGRSPMVRQLRVTDSPFPLKEDDEKDNQVDKAAEDFINRFYSQLRKQE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05430 174 Pfam Cotton fibre expressed protein 152 173 IPR008480 -
Tsu02g05430 174 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 173 - -
Tsu02g05430 174 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 173 - -
Tsu02g05430 174 MobiDBLite consensus disorder prediction 32 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05430 Tsu-Chr2 62820300 62820897 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05430 - - gmx:100786928 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05430 02 62820300 62820897 Tsu08g00371 08 3616036 3616707 PCT