Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00299 ATGGGTTGTTTTGATGAAGGGCATTTCAATGGTGAACTTGAAAATGGTGTGAGTATGTGTAGTGAGGTTGAAGATGAGGCAAATACAGCTGCTATTGAAGATGCTGTGAAGATTCTTTTGTTGGGTCTTGGTGAAGATATTAATAGGGAAGGTCTTAAAAAGACACCAATTCGCGTTGCAAAAGCTCTACGTGAAGGAACTAGAGGTTATAGACAAAAAGTTAAGGACATTGTGGAAGGTGCTTTATTTCCTGAAGCTGGCCTAGagaataataaaattggacATGCCGGGGGTGCTGGCGGACTTGTGATTGTCCGAGACATTGACCTTTATTCCTACTGTGAATCTTGCATGCTACCTTTCCAGGTCAAATGTCATGTTGGTTACGTCCCTTCTGGCCAAAGAGTTGTTGGATTAAGCAAGCTCTCTCGTGTTGCTGAAGTATTTGCTAAACGACTTCAAGAGCCTCAGCGTCTAGCAGACGAGGTGTGTTTGGCTTTGCAACAGGGAATAAGACCTGCAGGCGTAGCTGTCGTACTTCAGTGTACACATATTCACTTTCCAGACATAGAATCAATCTTTCTAGAATCAAACCAGAAAGGTTGGGTGAAGATACATGTTTCATCAGGTTCTGGTGTCTTTGAAAACAAAAACGCAGATGTATGGGCCGATTTCTTTTACCTTATTAAATCTAGAGGCGTTGATATGGAAAACATTCATGTTCGTGGTTCGTCTGACCAATGTTGGTGTCCGTCTCTTTCGGCTCTTTCCACTAAAGTTTCCTCCAAACTCGGACCAATCAATCCGGCAATGGTCACTGCAGTATCATCAATTCTAAATTCTTTGGGAGAAGATTCAGTTAGGAAGGAGCTTGTAGGGACTCCTAATCGATTCGTGAAATGGCTGTTAAACTTCCAAAGCATTGACATGGATGTGAAGCTGAATGGCTCCCTTCGTGGTGGGATAAAACCTTTGAATGCCGCTTGCGAGGTGGTAAATAACATCGACAAACAAATATACTCCGAGTTGAACTTGCCGTTTTGGTCACAATGTGAGCATCATATTCTTCCATTTCACGGTGTTGTTCACATAGGATACTTCCTTTCAGAAGGCTTCAATCCAATTGGAAAATCACTTTTACAGTCGATAGTTCATTTTTATGGTTTCAAGCTCCAAGTTCAGGAAAGGCTTACAAAGCAAATAGCAGAAACAATTTCACCGCTTTTAGGTGGAAATGTAATAGTAGTTGTAGAAGCAAGTCACACATGCATGATTTCTAGGGGAATCGAGAAGTTTGGAAGTAGTACAGCTACAATTGCTGTATTAGGATGCTTTTCAACTGACCTTGCTTCTAGGACCTCATTCTTGCAAAGTATTGCAAATGCTACATCTTCTGCTGGGCAATGA 1407 0.4129 MGCFDEGHFNGELENGVSMCSEVEDEANTAAIEDAVKILLLGLGEDINREGLKKTPIRVAKALREGTRGYRQKVKDIVEGALFPEAGLENNKIGHAGGAGGLVIVRDIDLYSYCESCMLPFQVKCHVGYVPSGQRVVGLSKLSRVAEVFAKRLQEPQRLADEVCLALQQGIRPAGVAVVLQCTHIHFPDIESIFLESNQKGWVKIHVSSGSGVFENKNADVWADFFYLIKSRGVDMENIHVRGSSDQCWCPSLSALSTKVSSKLGPINPAMVTAVSSILNSLGEDSVRKELVGTPNRFVKWLLNFQSIDMDVKLNGSLRGGIKPLNAACEVVNNIDKQIYSELNLPFWSQCEHHILPFHGVVHIGYFLSEGFNPIGKSLLQSIVHFYGFKLQVQERLTKQIAETISPLLGGNVIVVVEASHTCMISRGIEKFGSSTATIAVLGCFSTDLASRTSFLQSIANATSSAGQ 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00299 468 PANTHER GTP CYCLOHYDROLASE I 1 465 IPR001474 GO:0003934|GO:0046654
Tsu08g00299 468 Pfam GTP cyclohydrolase I 273 459 IPR020602 -
Tsu08g00299 468 Pfam GTP cyclohydrolase I 32 185 IPR020602 -
Tsu08g00299 468 Gene3D - 331 462 IPR043133 -
Tsu08g00299 468 Gene3D - 96 233 IPR043133 -
Tsu08g00299 468 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 5 230 - -
Tsu08g00299 468 PANTHER GTP CYCLOHYDROLASE I 1 1 465 - -
Tsu08g00299 468 Gene3D - 267 313 IPR043134 -
Tsu08g00299 468 Gene3D - 20 77 IPR043134 -
Tsu08g00299 468 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 265 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00299 Tsu-Chr8 2858269 2861276 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00299 K01495 - gmx:100780537 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00927 04 8862753 8866440 Tsu08g00299 08 2858269 2861276 PCT