Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00927 ATGGGCTGTTTAGATGACGGGCATTTCAATATTGAGCTTGAAAATGGAATGAATATTTGTTGTGGTGAAAATGGAAAAGATGGTGCTGTTATTGAAGATGCTGTTAAGGTTTTGTTAATGGGTCTTGGTGAAGATATTAATAGGGAAGGTATTAGAAAAACACCACTTCGTGTTGCCAAAGCCCTTCGTGAAGGAACAAGAGGTTACAGGCAAAAGGTGAAGGACATTGTTCAAGGTGCTTTATTCCCTGAAGCTGGTCTCGACAATAGAGTTGGTCATGCTGGTGGAGCAGGTGGACTTGTGATTGTCCGAGATATTGACTTGTTTTCCTATTGTGAGTCATGCATGCTTCCATTCCAGGTCAAGTGTCATGTGGGTTATGTTCCCTCTGGTGAAAGAGTTGTTGGTTTAAGCAAACTCTCTCGTGTTGCTGATGTATTTGCAAAACGACTCCAAGAGCCTCAGCGTCTCGCAAATGAAGTTTGTTCTGCTTTGCATCAAGGAATAAAGCCAGCAGGTGTTGCCGTCATATTTCAATGTACACACATCCACTTTCCAGACATAGAATCAGTCTTTCTCGACTCAAACCACCAAGGATTGGTTAAGATACTTGTTTCCGCTGGTTCTGgagtttttgaaaacaaaaatgcaGACGAATGGGCTGATTTCTTTAGTCTCCTCAATTTTAGAGGTATCAGTAAGGAAAAAATTCACTTTAGAGGATCATCTGACTTGTCCTGGTGTCCTTCTCAATCGGCCAAAGTTTCCTCCAAAATCGGAACCGTCAACCCTGCAATGGTCACTGCAGTTGCTTCAATTATCAAATCTTTGGGAGAAGATCCACTGAGGAAGGAGCTTAGAGGGACTCCAAGTAGATTTGtgaagtggttaatgaactttcAGAACAGCAACTTCGACATGAAATTGAATGGTTTTCTCAATGGTGGGATACATTCTTTAACCACAAATAAGGAGGTTGACatgaacaacaaaaaaatatgctCTGAGCTGAACTTAACATTTTGGTCACAATGTGAACACCATTTACTTCCATTTCATGGTGTTGTTCACATAGGTTACATCCTATCAGATGGATTTAGTCCTATTGGAAAATCTCTTTTACAATCGATAGTACATTTTTACGGTTTCAAGCTTCAAGTTCAGGAGAGGCTTACTAGACAGATAGCTGAGACAATTTCACCGCTGATCGGCGGAGATGTGATAGTAGTTGTAGAAGCAAGTCACACATGTATGATTTCTAGAGGTATTGAGAAGTTTGGAAGTAGTACTGCCACCATTGCTGTTTTAGGACAATTTTCGACCGACCTTGCCACAAGGGCTTCCTTCTTGCAGGGCATTCCAAGTCCTACATCTTCAGAGCATTGA 1386 0.3983 MGCLDDGHFNIELENGMNICCGENGKDGAVIEDAVKVLLMGLGEDINREGIRKTPLRVAKALREGTRGYRQKVKDIVQGALFPEAGLDNRVGHAGGAGGLVIVRDIDLFSYCESCMLPFQVKCHVGYVPSGERVVGLSKLSRVADVFAKRLQEPQRLANEVCSALHQGIKPAGVAVIFQCTHIHFPDIESVFLDSNHQGLVKILVSAGSGVFENKNADEWADFFSLLNFRGISKEKIHFRGSSDLSWCPSQSAKVSSKIGTVNPAMVTAVASIIKSLGEDPLRKELRGTPSRFVKWLMNFQNSNFDMKLNGFLNGGIHSLTTNKEVDMNNKKICSELNLTFWSQCEHHLLPFHGVVHIGYILSDGFSPIGKSLLQSIVHFYGFKLQVQERLTRQIAETISPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGQFSTDLATRASFLQGIPSPTSSEH 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00927 461 Gene3D - 94 230 IPR043133 -
Tsu04g00927 461 Pfam GTP cyclohydrolase I 268 453 IPR020602 -
Tsu04g00927 461 Pfam GTP cyclohydrolase I 31 183 IPR020602 -
Tsu04g00927 461 PANTHER GTP CYCLOHYDROLASE I 1 3 458 - -
Tsu04g00927 461 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 264 454 - -
Tsu04g00927 461 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 18 228 - -
Tsu04g00927 461 Gene3D - 321 455 IPR043133 -
Tsu04g00927 461 Gene3D - 27 77 IPR043134 -
Tsu04g00927 461 Gene3D - 260 304 IPR043134 -
Tsu04g00927 461 PANTHER GTP CYCLOHYDROLASE I 3 458 IPR001474 GO:0003934|GO:0046654
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00927 Tsu-Chr4 8862753 8866440 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00927 K01495 - gmx:100816351 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00927 04 8862753 8866440 Tsu08g00299 08 2858269 2861276 PCT