Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00129 ATGGAGAAATCAATTCATATTGCAGTTGTACCAGGTGTTGGTTATAGCCACTTATTCCCAATTCTTCAATTCTCCAAACTACTTGTTCACCATCATCCATACATTCATATCACATGCTTCATTCCTTCACATGATTCTCTCTCATCTGATTCAAAAACAATCCTTCAATCTCTTCCATCAAACATCAACTGTACTTTTCTTCCATCAGTGGATTCCAAAGACTTACCACAAGGAGTTCCTTTAGAAATTCAACTTCAACTCACACTAACTCATTCATTACCATCTATACATCAGGCCTTAAAGTCCTTAACTTTAAGGACACCCTTTGTGGCCATAATAGTTGATTCTTTTGCAATTGCAGCACTAGATTTAGCTAATGATTTCAACATGTTGTCCTATGTTTACTACCCTTCACCAGCCACCAATTTGTCCACATACTTCTATATGCTCAAACATGATAAAGAAATTTCAGGTGAGTACAGAGATCTTCCGGATCAGCCTATTCAAATACCGGGTTGTGTACCGATTCACGGTCGCGATCTTGTTGATCAAGCTCAAAATAGATCAAGTCAATCTTACAAATATTTACTTCAACGTGTTGAAAGATTTCGTCTTGTTGATGGGATTCTTATTAATACTTTCTTAGAAATTGAAAAAGATCCTATAGAAGCACTTGCAGAAGAAGGAAGTGGTAACCCTCCTGTGTATGCTGTTGGTCCTATTATCCAAAAGGGAACAGAAACATCTAAGGATGATGCTAATAGGTCGGAGTGTTTGTCGTGGTTGGATAAACAAAAATCCTGTTCAGTTTTGTATGTGTGTTTTGGAAGTGGTGGTACACTTTCACAAGAACAAATTAATGAGCTTGCTTTGGGTTTGGAATTGAGTAATCATAAGTTCTTATGGGTTGTAAGAGCACCAAGTAGTTTAGCAAATTCTGCGTATCTTTCGAACTCTGATGTTGATCCTTTACGGTTTTTACCATCTGGATTCTTGGAGAGAACCAAGGAACAAGGGATGGTTGTTCCATCATGGGCACCTCAGATTCAAATCCTAAGTCATAGTTCAGTTGGTGGATTCTTGACTCATTGTGGCTGGAATTCAACTCTCGAGAGTATGGCGCATGGTGTGCCACTAATCACATGGCCTCTATTTGCTGAGCAGAGGACGAATGCGGTTTTATTGAGTGAGGGACTGAAAGTAGGATTGAGGCCGAGATTTCATGAAAATGGTATTGTGGAAAGGGTAGAAATTGCGGAGTTGATCAAGTGTCttatggaaggggaagaagGTGGGAAATTGCGCAATAATATGAAGGAATTGAAAGAAGCTGCTAATAGTGCACACAGAGAAGATGGTTCTTCTACAAAGACTCTTTCTCAATTAGCATTCAAGTGGAGAAATTTGGtatag 1413 0.3829 MEKSIHIAVVPGVGYSHLFPILQFSKLLVHHHPYIHITCFIPSHDSLSSDSKTILQSLPSNINCTFLPSVDSKDLPQGVPLEIQLQLTLTHSLPSIHQALKSLTLRTPFVAIIVDSFAIAALDLANDFNMLSYVYYPSPATNLSTYFYMLKHDKEISGEYRDLPDQPIQIPGCVPIHGRDLVDQAQNRSSQSYKYLLQRVERFRLVDGILINTFLEIEKDPIEALAEEGSGNPPVYAVGPIIQKGTETSKDDANRSECLSWLDKQKSCSVLYVCFGSGGTLSQEQINELALGLELSNHKFLWVVRAPSSLANSAYLSNSDVDPLRFLPSGFLERTKEQGMVVPSWAPQIQILSHSSVGGFLTHCGWNSTLESMAHGVPLITWPLFAEQRTNAVLLSEGLKVGLRPRFHENGIVERVEIAELIKCLMEGEEGGKLRNNMKELKEAANSAHREDGSSTKTLSQLAFKWRNLV 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00129 470 Coils Coil 431 451 - -
Tsu08g00129 470 Gene3D Glycogen Phosphorylase B; 6 455 - -
Tsu08g00129 470 PANTHER GLYCOSYLTRANSFERASE 1 469 - -
Tsu08g00129 470 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 462 - -
Tsu08g00129 470 CDD GT1_Gtf-like 6 466 IPR002213 GO:0008194
Tsu08g00129 470 Gene3D Glycogen Phosphorylase B; 256 450 - -
Tsu08g00129 470 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 268 394 IPR002213 GO:0008194
Tsu08g00129 470 ProSitePatterns UDP-glycosyltransferases signature. 345 388 IPR035595 -
Tsu08g00129 470 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00129 Tsu-Chr8 1177229 1178983 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00129 6 467 Glycosyltransferase AT1G01420 46.667 2.34e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00129 K08237 - gmx:100778639 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00129 08 1177229 1178983 Tsu04g00812 04 7792111 7793817 PCT