Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00812 ATGACAAAAACAAGTCACATAGTTGTTATTCCAAGTCCTGGTTTCAGCCACTTAGTTCCAATATTAGAATTCACCAAAAGATTAGTCACTAATCACCCAAATTTTCATGTAACTTGCATCATTCCCTCACTTGGGTCACCACcagattcatcaaaatcatATCTTGAAACCATTCCACCAAATATAAATTCAATCTTTCTTCCACCAATCAACAAACATGACATACCTCAAGGAGTACATCCAGGAATCATAATTCAACAGACTCTTACTCTCTCTTTACCATCAATCCATCAAGCTTTAAAATCCTTAACTTCAAAAACACCATTGCTTGCTATAATTTCTGATACTTTTGCATATGAAGCACTTGATTTTGCAAAAGAGTTCAATTCTTTGTCTTACCTTTACTTCCCTTGTTCAACTTTTGTACTttcacttctttttcttttaccaaAACTTGATGAAGAGGTTTCATGTGAATACAAAGATTTACAAGAACCTATAAAATTAGAAGGATGTGTACCAATCAATGGTATTGATCTTCCAGCTGCAACAAAAGATAGATCACATGAAGGTTACAAAATGTTTCTTCAACGTGCAAAAAGTATGTATTTTGTTGATGGAATCTTGATTAATAGCTTCTTTGAATTAGAATCAAATGCTATTAAAGCATTGGAACAAAAGGGATATGGAAAAGTCAGTTTTTTTCCTGTTGGGCCTATTACACAAATAGGATCAAGtaataatgatgatgttgcTGATGAGTTTGAATGTTTGAAATGGTTAAAAAAACAacctcaaaattctgttttgtATGTTTCATTTGGAAGTGGTGGCACACTTTCACAAAGACAAATCAATGAGCTAGCTTTTGGTTTGGAGTTAAGTGGTCAAAGATTCATTTGGGTTTTGAGAGCACCAAGTGATTCTGTTAGTGCTGCTTATCTTGAAGCTACAAATGAAGATCCATTGAATTTTTTACCAAAAGGGTTTGtagaaagaacaaaagaaaaaggtttgatTTTGTCTTCATGGGCACCTCAAGTTGAAATACTTAAGCAAAATTCAGTTGGTGGGTTTTTAAGTCATTGTGGTTGGAATTCAATTTTGGAGAGTATACAAGTGGGGGTGCCAATAGTAGCCTGGCCTTTGTTTGCAGAACAAGCAATGAATGCTGTTATGTTAAGTGAGGATCTTGAAGTGGCAATAAGGTTGAAATATGAAGATGATGAGATTGTGGAAAAGGAGAAAATTGCAAAAGTGATTAAGTGTGTGATGGAAGGTGAAGAAGGTAAAGGAATGCGTGAAAGAATGAAGAGTTTGAAAGATTCTGCTGCTAATGCATTGAAAGATGATGGTTCTTCAATACAGACTCTGGCTCACTTGGCTAGCCAATGGAATTTAGGAAAATAA 1410 0.3255 MTKTSHIVVIPSPGFSHLVPILEFTKRLVTNHPNFHVTCIIPSLGSPPDSSKSYLETIPPNINSIFLPPINKHDIPQGVHPGIIIQQTLTLSLPSIHQALKSLTSKTPLLAIISDTFAYEALDFAKEFNSLSYLYFPCSTFVLSLLFLLPKLDEEVSCEYKDLQEPIKLEGCVPINGIDLPAATKDRSHEGYKMFLQRAKSMYFVDGILINSFFELESNAIKALEQKGYGKVSFFPVGPITQIGSSNNDDVADEFECLKWLKKQPQNSVLYVSFGSGGTLSQRQINELAFGLELSGQRFIWVLRAPSDSVSAAYLEATNEDPLNFLPKGFVERTKEKGLILSSWAPQVEILKQNSVGGFLSHCGWNSILESIQVGVPIVAWPLFAEQAMNAVMLSEDLEVAIRLKYEDDEIVEKEKIAKVIKCVMEGEEGKGMRERMKSLKDSAANALKDDGSSIQTLAHLASQWNLGK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00812 469 Gene3D Glycogen Phosphorylase B; 249 449 - -
Tsu04g00812 469 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 252 427 IPR002213 GO:0008194
Tsu04g00812 469 Gene3D Glycogen Phosphorylase B; 6 454 - -
Tsu04g00812 469 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 466 - -
Tsu04g00812 469 CDD GT1_Gtf-like 6 445 IPR002213 GO:0008194
Tsu04g00812 469 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 464 - -
Tsu04g00812 469 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
Tsu04g00812 469 PANTHER GLYCOSYLTRANSFERASE 1 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00812 Tsu-Chr4 7792111 7793817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00812 4 465 Glycosyltransferase AT1G01420 45.905 2.88e-150 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00812 K08237 - gmx:100776274 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00129 08 1177229 1178983 Tsu04g00812 04 7792111 7793817 PCT