Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00128 ATGGAGAAAACAGTTCACATTGCAGTTGTTTCAGGTGTTGGGTATAGCCATTTAGTCCCAATTCTTCAGTTTTCCAAGCAACTAGTTCAACTCCATCCAGAATTTCATGTCACATGCTTCATTCCCACACTTGGGTCTCCCTCAAGTGCCTCAAAATCTATCCTTCAAACTCTTCCATCAAACATcaactacacttttcttgaaccTGAGAACCCCAATGACCTACCACAAGGGACTCCCATCAACAGCATTCACCTCACACTGATTCATTCTCTGCCATACTTACATCAAGCCTTGAAAACCTTAACTTTAAGAACTCCCGTCGTGGCCTTGGTGGTTGATTCTTTTGCAAGTAAAGCACTAGACTTTGCTAAGGAATTTAACATGTTGTCCTATATATACTTCCCAAATGCAGCTTCTACATTGTCTTTCTGCTTTGAATTGCCTAAGTTGGATGAAGAAACAACATGTGAGTACAAAGATCTACCAAAGCCTATCACATTTCCAGGTTGTGTACCACTGCATGGGAGGGATTTCTTTTCCCATGTTCAAGATAGATCAAGTCAAGATTACAAACATTTCCTCCAACTTGTCAAGCTTTTACATATTGCTGATGGTATTCTTGTTAATAGCTTCTTAGAAATGGAAAGTGGTCCTATAAAAGCACTTAATGAGGAAGGAACTGTCAAGGGAAACCCTTCTGTTTATCCAGTTGGACCCATCATCCAAACAGTAACAAGTTCTGGTGATGATGATGGGTTGGAGTGTCTGTCATGGTTGGACAAACAACAATCTAGTTCAGTTTTGTATCTCTCTTTTGGGAGTGGTGGTACACTTTCACAGGAACAAATTGTTGAGTTGGCTTTAGGTTTGGAGTTGAGTAATCATAAATTCTTGTGGGTAGTAAGAGCACCAAGTAGTTCAGCTAATGTTGCATATCTTTCGGCACAAAATGATGTTGACCCTTTGCAATTTTTACCTTCTGGGTTTTTGGAAAGAACCAAGGAGAAAGGTTTGGTGATTCCATCATGGGCATCCCAGAGTCAAATCCTTAGTCATAGCTCAGTTGGTGGGTTCTTGACTCATTGTGGATGGAATTCAATCCTTGAGAGTGTAGTGCATGGTGTATCATTAATCACATGGCCTCTGTTTGCTGAGCAGAAAATGAATGCGGTTTTGCTGAGTGAAGGCTTGAAAGTGGGACTAAGGCCAAGAGTTAATGAAAATGACATTGTGGAAAGGGCAGAGGTTGCTAAGGTGATCAAGTGTCTCATGAAAGGAGAAGAAGGTGAGAAATTGCGCAATAATATGAAGGAATTAAAAGAAGCTGCTTCTAATGCAATCAAAGAAGAGGGGTCTTCTACAAAGACTATTTCTCAATTAGCAGTCATGTGGAGAAAGTTGGTGTAG 1410 0.3993 MEKTVHIAVVSGVGYSHLVPILQFSKQLVQLHPEFHVTCFIPTLGSPSSASKSILQTLPSNINYTFLEPENPNDLPQGTPINSIHLTLIHSLPYLHQALKTLTLRTPVVALVVDSFASKALDFAKEFNMLSYIYFPNAASTLSFCFELPKLDEETTCEYKDLPKPITFPGCVPLHGRDFFSHVQDRSSQDYKHFLQLVKLLHIADGILVNSFLEMESGPIKALNEEGTVKGNPSVYPVGPIIQTVTSSGDDDGLECLSWLDKQQSSSVLYLSFGSGGTLSQEQIVELALGLELSNHKFLWVVRAPSSSANVAYLSAQNDVDPLQFLPSGFLERTKEKGLVIPSWASQSQILSHSSVGGFLTHCGWNSILESVVHGVSLITWPLFAEQKMNAVLLSEGLKVGLRPRVNENDIVERAEVAKVIKCLMKGEEGEKLRNNMKELKEAASNAIKEEGSSTKTISQLAVMWRKLV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00128 469 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 259 395 IPR002213 GO:0008194
Tsu08g00128 469 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 460 - -
Tsu08g00128 469 PANTHER GLYCOSYLTRANSFERASE 1 468 - -
Tsu08g00128 469 Coils Coil 430 450 - -
Tsu08g00128 469 CDD GT1_Gtf-like 6 445 IPR002213 GO:0008194
Tsu08g00128 469 Gene3D Glycogen Phosphorylase B; 6 455 - -
Tsu08g00128 469 Gene3D Glycogen Phosphorylase B; 250 449 - -
Tsu08g00128 469 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00128 Tsu-Chr8 1174701 1176110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00128 4 466 Glycosyltransferase AT1G01420 47.537 1.76e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00128 K08237 - gmx:100778639 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00128 08 1174701 1176110 Tsu04g00813 04 7794439 7796656 PCT