Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00813 ATGATTGGTAACAGAAAGATTCTTACATTGATTGATTCTGGTGCCACTAGCAATTTCGTAGCAACTAGATTGGTGGAGGAGTTAGGACTGACCTTGATGAACACACCTACTTATGTTATTGAAGTAGGCAATTGCCACTTAGTCCCAATATTAGAATTCACCAAAAGATTAGTCACAAATCACCCAAATTTTCATGTAACTTGCATCATTCCCTCACTTGGCTCACCAccaaattcatcaaaatcataTCTTCAAACCATTCCACAAAACATAAACTCAATCTTTCTTCCACCAATCAACAAACAAGACTTACCTCAAGGAGTATACCCTGCAATCCTAATCCAAAAATCTGTTACTCTCTCTTTACCATCAATTCATCAAGCCTTAAAATCCTTGAATTCAAAAACACCTTTACATGCAATAATTGCTGATCTTTTTGCATTTGAAGCACTTGATTTTGCAAAAGAGTTCAATTCTTTGTCTTATCTTTACTTCCCTTGTTCAACTTTCACTCTTTCGTTTGTTTTACATTTGGCAAAACTTGATGAACAAGTTTCATGTGAATACAAAGATTTACAGGAACCTCTAAAGTTACAAGGATGTGTACCAATCAATGGTATTGATTTTCCATCAGCAACAAAAGATAGATCAAATATAGCTTACAAAAGTATTCTTCAACATGCAAAAAGTATGTATTTTGTAGATGGAATCTTGATTAATAGTTTCTTTGAATTAGAATCAAGTACTATAAAAGCATTGGAACAAAAGTTTGTTggaaaaatctgtttttttccTGTGGGGCCCATCACACAAATTAGCTCAAAAGAGTCATctaataatgatgttgatgatgagttAGAATGTTTGAAATGGTTAAAAAACCAacctcaaaattctgttttgtATGTTTCTTTTGGAAGTGGTGGAACACTTTCTCAAAGACAAATCAATGAGCTAGCTTTTGGTTTGGAATTGAGTGGTCAAAGATTCATTTGGGTTATGAGAGCACCAAGTGATTCAGTTAGTGCTACTTACCTTGAAGATGCAAATGATGATGACCCTTTGAAATTTTTACCAAAAGGGTTTTTggaaagaacaaaagaaaaaggtttgatTTTGGCATCATGGGCACCTCAAGTTGAAATACTTAAGCAAGATTCAGTTGGTGGATTTTTAAGTCATTGTGGTTGGAATTCAATTTTGGAGAGTATACAAGTGGGGGTGCCAATAGTAGCTTGGCCTTTGTTTGCAGAACAAGCAATGAATGCTGTTATGTTAAGTGATGGTCTTAAAGTAGCAATAAGgttgaaatttgaagatgatgagATTGTGGAAAAGGAAGAAATTGCAAAAGTGGTTAAGTGTTtgatggaaggggaagaaggTAAGGAAATGCGCGATAGAATGAAGAATTTACAAGATTCTGCTGAAAAAGCATTGAAAGATGATGGTTCTTCAATAGAGATTCTATCTCAGTTGGCTACTCAATTGGAAAATTTTGGTGGAATTTAG 1512 0.3128 MIGNRKILTLIDSGATSNFVATRLVEELGLTLMNTPTYVIEVGNCHLVPILEFTKRLVTNHPNFHVTCIIPSLGSPPNSSKSYLQTIPQNINSIFLPPINKQDLPQGVYPAILIQKSVTLSLPSIHQALKSLNSKTPLHAIIADLFAFEALDFAKEFNSLSYLYFPCSTFTLSFVLHLAKLDEQVSCEYKDLQEPLKLQGCVPINGIDFPSATKDRSNIAYKSILQHAKSMYFVDGILINSFFELESSTIKALEQKFVGKICFFPVGPITQISSKESSNNDVDDELECLKWLKNQPQNSVLYVSFGSGGTLSQRQINELAFGLELSGQRFIWVMRAPSDSVSATYLEDANDDDPLKFLPKGFLERTKEKGLILASWAPQVEILKQDSVGGFLSHCGWNSILESIQVGVPIVAWPLFAEQAMNAVMLSDGLKVAIRLKFEDDEIVEKEEIAKVVKCLMEGEEGKEMRDRMKNLQDSAEKALKDDGSSIEILSQLATQLENFGGI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00813 503 Gene3D Glycogen Phosphorylase B; 280 481 - -
Tsu04g00813 503 CDD retropepsin_like 2 70 - -
Tsu04g00813 503 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 46 502 - -
Tsu04g00813 503 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 39 501 - -
Tsu04g00813 503 ProSitePatterns UDP-glycosyltransferases signature. 376 419 IPR035595 -
Tsu04g00813 503 CDD GT1_Gtf-like 46 482 IPR002213 GO:0008194
Tsu04g00813 503 Coils Coil 462 482 - -
Tsu04g00813 503 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 284 464 IPR002213 GO:0008194
Tsu04g00813 503 PANTHER GLYCOSYLTRANSFERASE 39 501 - -
Tsu04g00813 503 Gene3D Glycogen Phosphorylase B; 44 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00813 Tsu-Chr4 7794439 7796656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00813 34 494 Glycosyltransferase AT1G01420 46.121 1.04e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00813 K08237 - gmx:100776274 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00128 08 1174701 1176110 Tsu04g00813 04 7794439 7796656 PCT