Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00127 ATGGAGAAAACAGTTCACATTGCAGTTGTTCCAGGTATTGGGTATAGCCATTTAGTCCCAATTCTTCAGTTTTCCAAGCAACTTGTTCAACTCCATCCAGACTTTCACGTCACATGCTTCATTCCCACACTTGGGTCTCCCTCAACTGCCTCAAAATCAATCCTTCAAACTCTTCCATCAAATATCAACTACACTTTTCTTCCACCTATGAACCCCAATGACCTACCACAAGGGACTCCTATGGAAAGCATTCACCTGACACTGATTCACTCTCTCCCATATTTACATCAGGCCTTGAACTCCTTAACTTTAAGGACTCCCCTTGTGGCCTTGGTGGTTGATCCTTTAGCTCTTAAAGCACTAGAATTTGCAAAGGAATTCAACATGCTGTCCTACATATACTTCCCTTCATCAGCTACTACACTGTCTTTGAGCTTCTATTTGCCTAAGTTGGATGAGGAAACATCTTGTGAGTACAAAGATCTACCAGAGCCTATCAAATTACCAGGTTGTGTACCATTGCATGGGAAGGATCTCTTTACCCTTGTTCAAGATAGATCAAGTCAAGATTACAAACATTTGCTCCAACTTATTAAGCTTTTAAGTATTGCTGATGCTGTTCTTGTAAATAGCTTCTTAGAAATGGAAAGGGGTCCTATAAAAGCACTAAACGAGGAAGGAATTGTGGGCAACCCTTCTGTTTATCCTGTTGGACCCATCATCCAGACAGTAACAAGTTATGTTGATGCTAATGGCTTGGAGTGTCTGTCATGGTTGGACAAACAACAATCTGGTTCAGTTTTGTATGTGTCTTTTGGGAGTGGGGGTACACTTTCACATGAACAAATTGTTGAGCTGGCTTTGGGTTTGGAGCTGAGTAATCATAAATTCTTATGGGTAGTAAGAGCACCAAGTAGTTCAGCCAATGCTGAATATCTTTCAGCACAAAATGATGTTGACCCGTTGCAATTTTTACCTTCTAGGTTTTTGGAGAGAACCAAGAGCAAAGGTTTGGTCATTCCATCATGGGCACCCCAGATTAAAATCCTTAGTCACAATTCAGTTGGTGGGTTCTTAACTCATTGTGGTTGGAATTCAACACTTGAGAGTGTGATGCATGGTGTACCACTAATCACATGGCCCTTGTTTGCTGAGCAGAAAATGAATGCAGTTTTGCTGAGTGAAGGCATAAAAGTGGGACTAAGGCCAAGAGTTAATGAAAATGACATTGTGGAAAGGGTAGAGGTTGCTAAGGTGATCAAGTGTCTCATGGAAGGAGAAGAAGGTGAGAGTTTGCGCAATAATATGAAGGAGTTAAAAGAAGCTGCTTCTAATGCAATCAAAGAAGATGGGTCTTCTACAAAGATTATTTCTCAATTAGCACTAAGGTGGAGAAAGTTGGTGTAG 1407 0.4101 MEKTVHIAVVPGIGYSHLVPILQFSKQLVQLHPDFHVTCFIPTLGSPSTASKSILQTLPSNINYTFLPPMNPNDLPQGTPMESIHLTLIHSLPYLHQALNSLTLRTPLVALVVDPLALKALEFAKEFNMLSYIYFPSSATTLSLSFYLPKLDEETSCEYKDLPEPIKLPGCVPLHGKDLFTLVQDRSSQDYKHLLQLIKLLSIADAVLVNSFLEMERGPIKALNEEGIVGNPSVYPVGPIIQTVTSYVDANGLECLSWLDKQQSGSVLYVSFGSGGTLSHEQIVELALGLELSNHKFLWVVRAPSSSANAEYLSAQNDVDPLQFLPSRFLERTKSKGLVIPSWAPQIKILSHNSVGGFLTHCGWNSTLESVMHGVPLITWPLFAEQKMNAVLLSEGIKVGLRPRVNENDIVERVEVAKVIKCLMEGEEGESLRNNMKELKEAASNAIKEDGSSTKIISQLALRWRKLV 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00127 468 Coils Coil 429 449 - -
Tsu08g00127 468 Gene3D Glycogen Phosphorylase B; 6 453 - -
Tsu08g00127 468 ProSitePatterns UDP-glycosyltransferases signature. 343 386 IPR035595 -
Tsu08g00127 468 PANTHER GLYCOSYLTRANSFERASE 1 467 - -
Tsu08g00127 468 Gene3D Glycogen Phosphorylase B; 249 448 - -
Tsu08g00127 468 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 249 393 IPR002213 GO:0008194
Tsu08g00127 468 CDD GT1_Gtf-like 6 444 IPR002213 GO:0008194
Tsu08g00127 468 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 467 - -
Tsu08g00127 468 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00127 Tsu-Chr8 1171767 1173542 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00127 4 465 Glycosyltransferase AT1G01420 48.172 2.61e-155 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00127 K08237 - gmx:100778639 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00127 08 1171767 1173542 Tsu04g00814 04 7796940 7798536 PCT