Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00814 ATGGCCAAAACAATTCATATAGCAGTAATTTCAATCCCTGCATTCAGCCACCAAGCTTCCATCATAGAATTCACCAAAAAACTCATTCATCACCATAATCACTTTCACATAACCCTAATCTTCCCCACAATAGATTCACCTCTCCAAACAACTCTCACACTACTCAAATCTCTCCCACCAAACATCACCTACACTTTCCTCCCTCCAATACCCAAAAATTCTCTCCCACAAAATCTCTCTCCAGCTGTCCAAATCCAACTAGCAGTATCTCAATCCATGCCATCTTTCCACACCACAATCTCTTCACTatgttcttcatcatcatcaacaccaaATCCACCACTTGTTGGTTTGATTTCTGATCCTTTTGCAAATGAATCACTTGAAGtagcaaaaaaattcaatcttttatCTTACATATATTTTCCACCTTCAACAATGACACTTTCACTTTTCATCCATTTTCCATCACTTCATGAAGAGATTTCATGTGAATTTAGAGATCACAATGAAGCTATTCAAATTCCAGGTTGTGTACCAATTCATGGAATTGATTTAcctgaacattttcaagataGAACTAGTCTTGCTTATGATTTGATTCTTCAACGTTGCAAAAGATTCAATCTTGCTGATGGGTTTTTGGTTAACAGTTTCatgaaaatggaagaaaaaacattGAAATCATTAGAAGAACATAAATGTTCTGTTTTTCTTGTGGGACCCATTATTCAAAATGGTTCGAATAATGAATCAAAAGGGTCAGATTCAGATTTAGAATGTTTGAGGTGGTTGGAAAAACAACCtcaaaaatctgttttttatgtttcattTGGAAGTGGTGGAACACTTTCTCAAGAACAAGTTAATGAATTAGCTTTTGGGTTAGAATTAAgtggtgtaaattttttatggattttaaGAGCACCTAGTGATTCATCAAATGAAGCTTATCTTGGTACAAAAAACGATGATGACCCTTTAAGTTTTTTACCACAAGGGTTTATAGAAAGAACAAGAAAACAAGGGTTAGTTGTACCTAATTGGGCCCcacaaacacaaattttgagTCATCGTTCGATCGGTGGATTTTTGACTCATTGTGGTTGGAATTCAGTGCTCGAAAGTATTGTGTTAGGTGTGCCTATGATCGCTTGGCCTTTGTTTGCTGAGCAAAAAATGAATGCAGTTTTGTTATGTGATGATGTTAATGTTGCAATGAGGTTAAAGTTTAATGAGGATGGTTTAGTTGAAAGAGATGAAATTGCTAAGGTGGTTAAAGGGTTAATGGAGGATGATGGAAATGGGATTAGAGGAAGGATTGAAGAGTTGAGAGATGATGCTGTTGAAGCTTTGAAAGATGATGGGTCTTCTACAAGGGCAATTTGTCAATTTGGTAATACATTGGAAAGCTTTGTGAACAACATATAG 1431 0.3284 MAKTIHIAVISIPAFSHQASIIEFTKKLIHHHNHFHITLIFPTIDSPLQTTLTLLKSLPPNITYTFLPPIPKNSLPQNLSPAVQIQLAVSQSMPSFHTTISSLCSSSSSTPNPPLVGLISDPFANESLEVAKKFNLLSYIYFPPSTMTLSLFIHFPSLHEEISCEFRDHNEAIQIPGCVPIHGIDLPEHFQDRTSLAYDLILQRCKRFNLADGFLVNSFMKMEEKTLKSLEEHKCSVFLVGPIIQNGSNNESKGSDSDLECLRWLEKQPQKSVFYVSFGSGGTLSQEQVNELAFGLELSGVNFLWILRAPSDSSNEAYLGTKNDDDPLSFLPQGFIERTRKQGLVVPNWAPQTQILSHRSIGGFLTHCGWNSVLESIVLGVPMIAWPLFAEQKMNAVLLCDDVNVAMRLKFNEDGLVERDEIAKVVKGLMEDDGNGIRGRIEELRDDAVEALKDDGSSTRAICQFGNTLESFVNNI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00814 476 PANTHER GLYCOSYLTRANSFERASE 3 472 - -
Tsu04g00814 476 PANTHER GLYCOSYLTRANSFERASE 3 472 - -
Tsu04g00814 476 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Tsu04g00814 476 Gene3D Glycogen Phosphorylase B; 6 458 - -
Tsu04g00814 476 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 464 - -
Tsu04g00814 476 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 259 399 IPR002213 GO:0008194
Tsu04g00814 476 Gene3D Glycogen Phosphorylase B; 252 453 - -
Tsu04g00814 476 CDD GT1_Gtf-like 6 451 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00814 Tsu-Chr4 7796940 7798536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00814 2 462 Glycosyltransferase AT1G01420 45.161 1.24e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00814 K08237 - gmx:100776809 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00127 08 1171767 1173542 Tsu04g00814 04 7796940 7798536 PCT