Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00126 ATGGATAAAACAGTTCAGATTGCAGTTGTTCCAGGTGTTGGGTATAGCCATTTAGTCCCAATTCTTCAGTTTTCCAAGCAACTTGTTCAATTACATCCAGACTTTCATGTCACGTGCTTCATTCCCACACTTGGGTCTCCCTCGAGTGCCTCAAAATCCATCCTTGAAACTCTTCCATCAAACATCAACTACAGTTTTCTTCCACCTGTGAACCCCAATGACCTACCACAAGGGACTCCCATGGAGAGCATTCACCTCACAATTGTTCACTCTCTCCCTTATTTACATCAGGCCTTGAACTCCTTAACTTTAAGGACTCCCCTTGTGGCCTTGGTGGTTGATCCTTTGGCTATTAAAGCACTAGACTTGGCTAAGGAATTCAACATGTTGTCCTACATATACTTCCCTTTATCAGCTACTACACTTTCTTTCTGCTTCTATATGCCTAAGTTGAATGAGGAAACATCATGTGAGTACAAAGATCTACCAGAGCCTATCAAATTACCAGGTTGTATACCAATCCACGGGAGAGATCTCTTTACCAATGTTCAAGATAGATCAAGTCCAGAGTACAAACAATTCCTCCAACTTCTTAAGTCTTTAAGTATTGCTGATGGTATTCTTGTTAATAGCTTCTTAGAAATGGAAAGCGGCCCTATAAAAGCACTAAATGAGGAAGGAAGTGTCAAGGGCAACCCTTTTGTTTATCCTGTTGGACCCATCGTCCAAACAGCAACAAGTTCTGCTGATGCTAATGGGTTGGAGTGTCTGTCATGGTTGGACAAACAACAATCTTGTTCAGTTTTGTATGTGTCATTTGGGAGTGGGGGTACACTTTCACTGGAACAAATTGTTGAGTTGGCTTTGGGCTTGGAGTTGAGTAATCATAAATTCTTATGGGTTTTACGAGGACCAAATAGTTCAGCCAATGCTGCATACCTTTCACCACAAAATGATGTTGACCCTTTGCAATTTTTACCTTCTGGGTTTTTGGAGAGAACCAAGGGCAAAGGTTTGGTCATTCCATCATGGGCACCCCAGATTGAAATCCTTAGTCACAATTCAGTTGGTGGGTTCTTGACTCATTGTGGTTGGAATTCAACCATTGAGAGTGTGGTACATGGTGTACCACTAATCACATGGCCCCTATTTGCTGAGCAGAATATGAATGCGGTTTTGCTGAGTGAAGGCATAAAAGTGGGACTGAGGCCAAGAGTTAATGAAAATGACATTGTGGAAAGGGTAGAGGTTGCTAACGTGATCAAGTGTCTCATGGAAGGAGAAGAAGGTGAGAAATTGCGCAATAATATGAAGGAATTAAAAGAAGCTGCTTCTAATGCAGTCAAAGAAGATGGGTCTTCTACAAAGACTATTTCTCAATTAGCACTCAAGTGGAGAAAGTTGATGTAG 1410 0.4163 MDKTVQIAVVPGVGYSHLVPILQFSKQLVQLHPDFHVTCFIPTLGSPSSASKSILETLPSNINYSFLPPVNPNDLPQGTPMESIHLTIVHSLPYLHQALNSLTLRTPLVALVVDPLAIKALDLAKEFNMLSYIYFPLSATTLSFCFYMPKLNEETSCEYKDLPEPIKLPGCIPIHGRDLFTNVQDRSSPEYKQFLQLLKSLSIADGILVNSFLEMESGPIKALNEEGSVKGNPFVYPVGPIVQTATSSADANGLECLSWLDKQQSCSVLYVSFGSGGTLSLEQIVELALGLELSNHKFLWVLRGPNSSANAAYLSPQNDVDPLQFLPSGFLERTKGKGLVIPSWAPQIEILSHNSVGGFLTHCGWNSTIESVVHGVPLITWPLFAEQNMNAVLLSEGIKVGLRPRVNENDIVERVEVANVIKCLMEGEEGEKLRNNMKELKEAASNAVKEDGSSTKTISQLALKWRKLM 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00126 469 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 460 - -
Tsu08g00126 469 CDD GT1_Gtf-like 7 445 IPR002213 GO:0008194
Tsu08g00126 469 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 248 426 IPR002213 GO:0008194
Tsu08g00126 469 Gene3D Glycogen Phosphorylase B; 249 449 - -
Tsu08g00126 469 Coils Coil 430 450 - -
Tsu08g00126 469 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 468 - -
Tsu08g00126 469 PANTHER GLYCOSYLTRANSFERASE 1 468 - -
Tsu08g00126 469 Gene3D Glycogen Phosphorylase B; 7 455 - -
Tsu08g00126 469 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00126 Tsu-Chr8 1169023 1171009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00126 4 466 Glycosyltransferase AT1G01420 48.283 3.58e-156 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00126 K08237 - gmx:100778639 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00126 08 1169023 1171009 Tsu04g00816 04 7804390 7806086 PCT