Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00816 atgacaaaaaaaactcacataGCTGTTATTCCAAGTCCTGGTTTCAGTCACTTAGTTCCAATATTAGAATTCACCAAAAGATTAGTCACAAATCATCCAAATTTTCATGTAACTTGCATCATTCCCTCACTTGGGTCACCACcagattcatcaaaatcatATCTTGAAACCATTCCACCAAACATAAATTCAATCTTTCTTCCACCAATCAATAAACAAGATGTACCTCAAGGAGCATATCCTGGAATCCTAATTCAACTCACTGTTACACTCTCTTTACCATCAATTCATCAAGCCTTAAAATCCTTGAATTCAAAATCACCTTTACTTGCTATAATTTCTGATGCTTTTGCATTTGAAGCACTTGATTTTGCTAAAGAGTTCAATTCTTTGACTTACCTTTACTTCCCTTGTAATACTTTTGTACTATCACTTGTTTTGGAAATGCCAAAACTTGATGAACAAGTTTCAGGTGAATACAAAGATTTACAAGAACCTATAGGGTTATTAGGATGTGTACCAATCAATGGTATTGATCTTCCAACACCAACAAAAAATAGATCAAGTGAAGCTTACAAGAAGTATCTTCAACGTGCAAAAGGTATGTATTTGGTTGATGGAATCATTTTTAATAGCTTCTTTGAATTGGAATCAAGTGCTATTGAAGCTTTGGAACAAAAGGGTCATggaaaaatcagtttttttccTGTTGGGCCTATTACACAAATAGGATCAAGtaataatgatgatgttgttgatgagTTAGAATGTTTGAAATGGTTGAAAAAACAacctcaaaattctgttttgtATGTTTCTTTTGGAAGTGGTGGAACACTTTCTCAAAGACAAATCAATGAAATAGCTTTTGGATTGGAATTGAGTGGTCAAAGATTCATTTGGGTTGTGAGAGCACCAAGTGATTCAGTTAATGCTGCTTACTTTGAAAATTCAAATGATGTTGATCCTTTGAAATTTTTACCAAATGGGTTTTTggaaagaacaaaagaaaaaggttttaTTTTGGCATCATGGGCACCTCAAGTTGAAATACTTAAGCAAGATTCAGTTGGTGGATTTTTAAGTCATTGTGGTTGGAATTCAATTTTAGAGAGTATACAAGTGGGGGTGCCAATAGTAGCTTGGCCTTTGTTTGCAGAACAAGCAATGAATGCTGTTATGTTAAGTGATGGTCTTAAAGTGGCTTTAAGGTTGAAatatgaagatgaagagattgtTGAAAAGGAGAAAATTGCAAAAGTGATTAAGTGTTTGATGGAAGGTGAAGAAGGTAAAGAAATGCGTGAAAGAATGAAGAGTTTGAAAGATTCTGCTGCTAATGCATTGAAAGATGATGGTTCTTCAATAAAGTCTCTTTCTAACTTGGCTAGTCAATGGGAAAAATTTGGTGggatttaa 1419 0.3087 MTKKTHIAVIPSPGFSHLVPILEFTKRLVTNHPNFHVTCIIPSLGSPPDSSKSYLETIPPNINSIFLPPINKQDVPQGAYPGILIQLTVTLSLPSIHQALKSLNSKSPLLAIISDAFAFEALDFAKEFNSLTYLYFPCNTFVLSLVLEMPKLDEQVSGEYKDLQEPIGLLGCVPINGIDLPTPTKNRSSEAYKKYLQRAKGMYLVDGIIFNSFFELESSAIEALEQKGHGKISFFPVGPITQIGSSNNDDVVDELECLKWLKKQPQNSVLYVSFGSGGTLSQRQINEIAFGLELSGQRFIWVVRAPSDSVNAAYFENSNDVDPLKFLPNGFLERTKEKGFILASWAPQVEILKQDSVGGFLSHCGWNSILESIQVGVPIVAWPLFAEQAMNAVMLSDGLKVALRLKYEDEEIVEKEKIAKVIKCLMEGEEGKEMRERMKSLKDSAANALKDDGSSIKSLSNLASQWEKFGGI 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00816 472 Gene3D Glycogen Phosphorylase B; 249 450 - -
Tsu04g00816 472 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 253 433 IPR002213 GO:0008194
Tsu04g00816 472 Gene3D Glycogen Phosphorylase B; 6 455 - -
Tsu04g00816 472 PANTHER GLYCOSYLTRANSFERASE 1 470 - -
Tsu04g00816 472 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 471 - -
Tsu04g00816 472 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 470 - -
Tsu04g00816 472 CDD GT1_Gtf-like 6 446 IPR002213 GO:0008194
Tsu04g00816 472 ProSitePatterns UDP-glycosyltransferases signature. 345 388 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00816 Tsu-Chr4 7804390 7806086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00816 6 467 Glycosyltransferase AT1G01420 46.436 9.01e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00816 K08237 - gmx:100776274 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00126 08 1169023 1171009 Tsu04g00816 04 7804390 7806086 PCT