Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00067 ATGGGTTGCACGGCGTCTAAACTCGACAATGAAGAAACGGTACGGCGGTGCAAGGAGCGCCACCGTCTAATGAAGGAAGCAGTTTACGCTCGTCATTACCTAGCCGCGGCGCATTCCGATTACTGTAACTCTCTTCGTCTTACTGGTTCTGCACTCTGCACTTTCGCCGCCGGTGAACCTCTCGCCGTCTCCGACGACATCCCTGCCGTTTTCGTCAACAAGAAACCTCACcagccaccaccaccaccacctcctcctCCTGCTGCAACCACCGTAACAACCTCAAAACTCCCTAACATTTCTGAAACTCGTCGCCGGAAACCACCGCCGAAGCTTCCACACATTCTCTCCGATTCAAGTGTTTGTTCAACGCCGAGAAGCGAGTTTCCGACCTGGTTCTTCCCAACCGCACACCAAGCACCATCCACAGCTTCCGAAACCTCTTCAGTTTGGAATTGGGAGAATTTTCATCCTCCTCCATCTCCACCAAATTCCGAATACTTCCGGCAGCGATCTCATCCTCCGAATCAGAAACCCGAAAATCCAAATCCCGAAGCTCTTGGATCCGATTCAGAATCAGATTCTTTCTATAACATGTTCCACTCCAAAAATCATATTCAGAAACTCAAAATCCAAACTATAAACGGTTATACTCAAAATCAGCATCAACGGAACCGTTCGAAAGCCGAAGATTTCGAGAGCGAGAGATCCGAACCAGAACCGGAACCAGAACCAGAACCAGATCCAGGTCGATCGGAAACGGAAAGAGAAGAGGTTCGGTGCAGTGATTGGGAAGACTGTTACGGATCAGCGAGCTCGTCTGATAGAGAGGAAGAAATTGACGGTTTGAGATCATCGGTGAAACCGGAGTCGGTTACTGGCGGTGATATTCCGGCGAGAAAAGAGGAGAAGATCGGCGAAGTGAAACAGGAAAAGGTTATGATGAAGCATAAGGATTTGAAGGAGATTGTTGAGGCGATTAGTGAGAATTTTGAGAAAGCGGCGGTGGCCGGAGATGAGTTATCGGAGATGCTACAGATTAGTAGGGCTCAGCTTGATCGGAGTTTCAGTCAATTGAAAAAAATAGTGTATCACTCGAGTAATTTATTGAGCAACGTGAGTTCTTGTTGGACCTCAAAGCCGCCATTGGCAGTTAAGTACCGGTTCGATGCCGGTTCACTTGAAGGACCGGGCGGTCCGAAGAGCCTCTGCTCCACTTTAGACCGGCTTTTGGCTTGGGAAAACAAACTCTGTCAGGAAGTGAAGGCTAGAGAATGTGTAAAGATTGAGCATGAAAAGAAATTGTCAGCTATGCAGAGTCAAGAATGGAAGGGAGATGATGAAGCAAAGATAGACAAAACCAAGGCAACCATAACAAGGTTACAGTCACTAATTATTGTAACATCACAAGCAGTGTCTACTACCTCAGCTGCCATTGATGGTCTTAGAGACTCTGATCTTGTTCCTCAGCTTGTTCAACTTTGTCATGGAATCATTTACATGTGGAGATCAATGCACCAGTACCATGAAACACAAAGCAAAATTGTACAACAAGTTCGCGGCCTTGTGAACCGATCATCGAAAGGTCACTCGACGTCTGAATCACACAAACAAGCAACTCGAGATCTCGAATCAGCTCTGTCAGCTTGGAACTCAAGTTTTATCCGGATTATAAAATTTCAAAGAGACTTTATTCTATCTCTACATGGCTGGTTTAAGCTGAACCTTATTCCAGTCAACAAtgacaacaaaaacaacaacaaaattgaaCAATCAGATGCATTTTACTTTTGTGATGAATGGAAACTTGCCCTTGACCGTGTCCCGGACACGGTTGCTTCAGAAGCAATCAAAAGCTTCATCAATGTTGTCCATGTAATATCTGTTAAGCAATGTGAAGAACTCAAGGTTAAAAAGAAAACTGACACTGCTTTCAAGGAACTAGAGAAAAAATCTTCATCTATAAGTAACATAGAAAAGAAGTTTTACAACTCATATTCTATGGTTGGTATTGGAATAATTCCAAATTCTGTGGATGATATTGGACAAGGCTTGGATGCAAGAGACCCTCTTGCtgagaaaaaattggaactAGAAGCTTATCAAAGACGCGTCGAAGATGAAAAGATGAAACATTTAAAGGCTATTGAGGTTACAAGAGCTATGACACTTAACAATCTACAGACAGGTTTGCCTGGAGTGTTTCAGGCATTGACAAGTTTTTCTTCATTATTCATTGAGGTTCTTGAATCAGTATGTGCCCGTTCATATGCCATCAAGTAG 2283 0.4297 MGCTASKLDNEETVRRCKERHRLMKEAVYARHYLAAAHSDYCNSLRLTGSALCTFAAGEPLAVSDDIPAVFVNKKPHQPPPPPPPPPAATTVTTSKLPNISETRRRKPPPKLPHILSDSSVCSTPRSEFPTWFFPTAHQAPSTASETSSVWNWENFHPPPSPPNSEYFRQRSHPPNQKPENPNPEALGSDSESDSFYNMFHSKNHIQKLKIQTINGYTQNQHQRNRSKAEDFESERSEPEPEPEPEPDPGRSETEREEVRCSDWEDCYGSASSSDREEEIDGLRSSVKPESVTGGDIPARKEEKIGEVKQEKVMMKHKDLKEIVEAISENFEKAAVAGDELSEMLQISRAQLDRSFSQLKKIVYHSSNLLSNVSSCWTSKPPLAVKYRFDAGSLEGPGGPKSLCSTLDRLLAWENKLCQEVKARECVKIEHEKKLSAMQSQEWKGDDEAKIDKTKATITRLQSLIIVTSQAVSTTSAAIDGLRDSDLVPQLVQLCHGIIYMWRSMHQYHETQSKIVQQVRGLVNRSSKGHSTSESHKQATRDLESALSAWNSSFIRIIKFQRDFILSLHGWFKLNLIPVNNDNKNNNKIEQSDAFYFCDEWKLALDRVPDTVASEAIKSFINVVHVISVKQCEELKVKKKTDTAFKELEKKSSSISNIEKKFYNSYSMVGIGIIPNSVDDIGQGLDARDPLAEKKLELEAYQRRVEDEKMKHLKAIEVTRAMTLNNLQTGLPGVFQALTSFSSLFIEVLESVCARSYAIK 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00067 760 MobiDBLite consensus disorder prediction 243 285 - -
Tsu08g00067 760 MobiDBLite consensus disorder prediction 74 91 - -
Tsu08g00067 760 MobiDBLite consensus disorder prediction 72 121 - -
Tsu08g00067 760 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Tsu08g00067 760 Coils Coil 691 711 - -
Tsu08g00067 760 MobiDBLite consensus disorder prediction 166 197 - -
Tsu08g00067 760 MobiDBLite consensus disorder prediction 218 297 - -
Tsu08g00067 760 MobiDBLite consensus disorder prediction 153 197 - -
Tsu08g00067 760 Pfam Protein of unknown function (DUF632) 320 625 IPR006867 -
Tsu08g00067 760 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 1 127 - -
Tsu08g00067 760 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 131 760 - -
Tsu08g00067 760 PANTHER UNCHARACTERIZED 131 760 - -
Tsu08g00067 760 PANTHER UNCHARACTERIZED 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00067 Tsu-Chr8 594247 599080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00067 402 624 Acyl Lipid Metabolism Gene Families AT2G27090 32.035 1.93e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00067 - - gmx:100792843 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00067 08 594247 599080 Tsu08g00067 08 594247 599080 ECH
Tsu08g00067 08 594247 599080 Tsu04g01888 04 20257062 20261580 PCT