Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01888 ATGGGTTGCACTGCTTCCAAGCTAGAAAATGAAGACACCGTACGACGATGCAAAGACCGTCGCCGTCTCATGAAAGAAGCCGTCTACGCGCGTCACCATCTCGCCGCCGCACACTCCGACTACTGTCGTTCTCTCCGCCTCACCGGCACCGCTCTTTCCACATTCGCCTCCGGTGAACCTCTTTCCGTCTCCGATAACACCCCCGCCGTATTCATCAACCATAAAACAACCACCACTCCaaccaccacaacaacaacCTTCCACCACCCACCAAaacaacaaccacaaccacCGCCACCTTCTTCCTTCCACCGTGCTCCACCACCACAACCATTTCAACCTTCACCTTCTCCGACCATAGCATCCTCTAAACTTCCACACATCCTCTCTTCTACGTCAATCACTTCAACCAACCAAAACCACCACCCTCGCCGCCGTAAACAACCGCCACCAAAACTTCCTCACATTCTCTCCGATTCAAGCCCTTCTTCAACTCCACGTAGCAATGCCTCTAACAATTTCGCTTCCAATTTCTTCCCTACAGCACATTCTACATACTCTTCAACCCCTTCTCAAACTTCCTCAGTTTGGAACTGGGAAAATTTCTACCCTCCTCCACCGCCACCACCCGGTTCCGATTATTTCGATCGAGAACAAGAACATGAAAATGAAGATTCTACTTCTCAATTCTCTTTTAAGTCAAGAAATAGTGAAGTTCCTTATTCCCGACAACaacctcaacaacaacaacaacaacctcgGCAGCAACAACAAACACAGACACAAACATATCAACAACAACGTTATGTTAATCCAACAGCACATGAAGTTGAAGGATTTGATTCTGAGAGATCCGAATATGATTATTTCAATGAAAAACTAGCAATGGTTCAAaagaatcatcatcataatcatcatcatttgGAGGAACATACTGAGACTGAGAGAGAAGAAGTTGAGTGTAGTGAATGGGGAGATCATTACAGTACAACAACATcctctgaggatgatgatgaggaAGATGAGGATGATAATGATCATGATCATGATGATGGAGTTGATGGTGATGTTGAGTCAAGGTCTGAGATTGGGACTAGGTCCAATTTCGGGTCATCTTCTGCGGCGGCTAAAGGGTATGTAGCGACGGTGGGGAAATCGGATGACGTGGCATCGTCGTCTTCCATGGGTGAAGGAGTGATGGAGATGAAGATGGTGGTTAGGCATAGAGATTTGAAGGAAATTGTTGATTCTATTAAGGAGAATTTTGATAAAGCTGCTGTTGCTGGAGATCAGGTTTCTGAGATGCTTGAGATTAGTAAAGCTCAGCTTGATCGAAGTTTCAGGCAATTGAAAAAAACTGTGTATCACTCAAATAGCTTATTGAGCAGCCTAAGCTCAACTTGGACCTCAAAACCACCGTTGGCAGTTAGGTACCGGCTTGACACCGGCTCATTGGATGAACCGGGTGGTGGTCAGAAGAGTCTTTGCTCCAGTTTGGAACGGCTTTTGGCTTGGGAGAAGAAACTCTATGAGGAAGTCAAGACTAGAGAAGGCGTGAAGATTGAACATGAAAAGAAATTGTCAGCACTGCAGAGTCAGGAATACAAAGGAGACGATGAAGCAAAGATATTCAAAACTAAGTCGGCCATAAATAGGCTGCAGTCACTAATTGTTGTTACATCACAGGCCGTGTCTACCACCTCGACCGCTATTATTGGCCTTAGAGACTCTGATCTTGTTCCTCAGCTTGTTGAGCTCTGTCATGGGTACGTACGCTTCTTCTGGAATTGCTTTACTATTTTGTTTAATGTTGGGAATTGA 1821 0.4272 MGCTASKLENEDTVRRCKDRRRLMKEAVYARHHLAAAHSDYCRSLRLTGTALSTFASGEPLSVSDNTPAVFINHKTTTTPTTTTTTFHHPPKQQPQPPPPSSFHRAPPPQPFQPSPSPTIASSKLPHILSSTSITSTNQNHHPRRRKQPPPKLPHILSDSSPSSTPRSNASNNFASNFFPTAHSTYSSTPSQTSSVWNWENFYPPPPPPPGSDYFDREQEHENEDSTSQFSFKSRNSEVPYSRQQPQQQQQQPRQQQQTQTQTYQQQRYVNPTAHEVEGFDSERSEYDYFNEKLAMVQKNHHHNHHHLEEHTETEREEVECSEWGDHYSTTTSSEDDDEEDEDDNDHDHDDGVDGDVESRSEIGTRSNFGSSSAAAKGYVATVGKSDDVASSSSMGEGVMEMKMVVRHRDLKEIVDSIKENFDKAAVAGDQVSEMLEISKAQLDRSFRQLKKTVYHSNSLLSSLSSTWTSKPPLAVRYRLDTGSLDEPGGGQKSLCSSLERLLAWEKKLYEEVKTREGVKIEHEKKLSALQSQEYKGDDEAKIFKTKSAINRLQSLIVVTSQAVSTTSTAIIGLRDSDLVPQLVELCHGYVRFFWNCFTILFNVGN 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01888 606 MobiDBLite consensus disorder prediction 91 116 - -
Tsu04g01888 606 MobiDBLite consensus disorder prediction 214 228 - -
Tsu04g01888 606 MobiDBLite consensus disorder prediction 229 272 - -
Tsu04g01888 606 PANTHER UNCHARACTERIZED 1 592 - -
Tsu04g01888 606 MobiDBLite consensus disorder prediction 117 139 - -
Tsu04g01888 606 MobiDBLite consensus disorder prediction 77 281 - -
Tsu04g01888 606 MobiDBLite consensus disorder prediction 333 351 - -
Tsu04g01888 606 Pfam Protein of unknown function (DUF632) 411 593 IPR006867 -
Tsu04g01888 606 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Tsu04g01888 606 PANTHER BZIP DOMAIN CLASS TRANSCRIPTION FACTOR (DUF630 AND DUF632)-RELATED 1 592 - -
Tsu04g01888 606 MobiDBLite consensus disorder prediction 306 324 - -
Tsu04g01888 606 MobiDBLite consensus disorder prediction 300 371 - -
Tsu04g01888 606 MobiDBLite consensus disorder prediction 157 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01888 Tsu-Chr4 20257062 20261580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01888 497 604 Acyl Lipid Metabolism Gene Families AT2G27090 36.937 3.38e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01888 - - gmx:100815888 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00067 08 594247 599080 Tsu04g01888 04 20257062 20261580 PCT