Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04400 ATGTCGTTGATTACAGAAGAACTCAAATCGAAATCAGAGGTTTACCATGGTGACCAAATCTGTCAAGCGAAATCAAAAGAACTTCTGAGAGAAATTGTTCTTCCAAATGGTCTTTTACCATTGAAAGACATCATTGAAGTTGGTTACAACAGAGAAACaggttttgtttggttgaaaCAGAAGAAAGCAATAACACATAAGTTTGAGAAAATTGGTAAACTAGTTTCATATGCTACTGAAGTTACTGCACAAGTTGAAAAAGGTAAGATTAAGAAACTTAATGGTGTTAAAACTAAAGAGCTTTTGATTTGGATCACACTTAGTGatatttatgttgatgatcCACCAACTGgtaaaatcacttttaaaacaCCTGCTGGTCTTTCTAGAACTTTTCCTGTTTCTGCTTTTGAGGTTGAAGAAGACAAATCAACTCTTGTTGTTAACAACAAAGTTAATGAAACTGTTTCTGCTGGTGCTGGTGCTGGTGTTAAAGAGGTTTAA 504 0.3155 MSLITEELKSKSEVYHGDQICQAKSKELLREIVLPNGLLPLKDIIEVGYNRETGFVWLKQKKAITHKFEKIGKLVSYATEVTAQVEKGKIKKLNGVKTKELLIWITLSDIYVDDPPTGKITFKTPAGLSRTFPVSAFEVEEDKSTLVVNNKVNETVSAGAGAGVKEV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04400 167 PANTHER PLANT/F25P12-18 PROTEIN 2 156 - -
Tsu07g04400 167 SUPERFAMILY At5g01610-like 3 143 IPR036758 -
Tsu07g04400 167 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Tsu07g04400 167 Gene3D - 5 149 IPR036758 -
Tsu07g04400 167 PANTHER T31J12.3 PROTEIN-RELATED 2 156 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04400 Tsu-Chr7 49181181 49182043 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04400 - - vra:106757663 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04400 07 49181181 49182043 Tsu01g03582 01 43734748 43735266 PCT