Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03582 ATGTCTCTGATCACTGAAGAGATCAAAGCCAAAGCAGAAGTATACCAAGGAGATGAAATCTGCCAAGTGAAATCCAAGGAACTGCTCTTGGAAATAAACCTACCCAATGGCCTTTTGCCTTTGAAAGACATTGAAGAATGTGGATATCATAGGGAGAGTGGATTTGTGTGGCTTAAGCAGAAAGCAAGCAATACCCACAAGTTTGAGAAGGTTGATAGGCAAGTGACCTATGGTACTGAAGTTACTGCCTATGTTGAGGTTGGTAAGATCAAGAAGCTAACTGGTGTGAAGGTGAAGGAGCTGTTGGTTTGGCTTCCACTGCATGAAATTGAATTGGATAATCCACCTACTGGCAAAATCACTTTCAGGGCTATTACAGGGCTTTTCAGGACATTCCCTGCCTCGGCTTTTGAATTAGACGAGGAAGTTAAGGATGTGAAGGAAGAAAACAAAGATCAAGTCAAAGAAGCAGAAGCACCTGCTGCTACTGCTGCTGCTGTTGAAGTCAAAGAGGTCTGA 519 0.4316 MSLITEEIKAKAEVYQGDEICQVKSKELLLEINLPNGLLPLKDIEECGYHRESGFVWLKQKASNTHKFEKVDRQVTYGTEVTAYVEVGKIKKLTGVKVKELLVWLPLHEIELDNPPTGKITFRAITGLFRTFPASAFELDEEVKDVKEENKDQVKEAEAPAATAAAVEVKEV 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03582 172 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Tsu01g03582 172 PANTHER PLANT/F25P12-18 PROTEIN 2 160 - -
Tsu01g03582 172 PANTHER T31J12.3 PROTEIN-RELATED 2 160 IPR007493 -
Tsu01g03582 172 Coils Coil 136 156 - -
Tsu01g03582 172 Gene3D - 4 149 IPR036758 -
Tsu01g03582 172 SUPERFAMILY At5g01610-like 3 145 IPR036758 -
Tsu01g03582 172 MobiDBLite consensus disorder prediction 151 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03582 Tsu-Chr1 43734748 43735266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03582 - - jre:108987755 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04400 07 49181181 49182043 Tsu01g03582 01 43734748 43735266 PCT