Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04399 ATGACATCAATCAACCTTATTAGTAATTGTACCATGAAACCATCCTCTAGAATTCTCGAACTTGGTcgaaaaaattcatcttttttctcAAGATGTTATCATTCTCTTACAATGTCAACATCATTCTCTAATAACCCTCTTGTCCTCAATCTTGATTGCAAAACCAAGCAATACCCTTCTCGCGTATTTGAATTTAAACGCGTAATGAATGGTTTTCAACAAGTTTTGCGATTACCCTCTTGGAATTTAGGCCATTCAAGAACTTTTCTCAATTTAAGAGCAACAAAAACCGAATGTGTATCTTCTATTGGTGGAGTATCCTTCAAGGCACGTGAATTCTCAAACTCTGTTGAGACCAAACGTGGTTTAAGAGTTGGTAAAGATGATAACAAGGGTGGAGGAGATGATGAGGAAGATTTGAAGGAAAAGAATTCGAAGAATGGATCCGTTGGAAAGAAGaaatttgatgatgaagaaacaGAAGTGGAGAAAGAAGCATGGAAATTGTTGCAGAAAGCACTTGTTACATATTGTGATACACCTGTGGGAACCGTAGCGGCAAATGATGATTCGGGATCGCCATTGAATTATGATCAAGTTTTTATTCGAGATTTTGTCCCTTCTGCTCTAGCTTTCTTGCTCAAGGGTGAACATGAGATTGTCAAGAATTTTCTCCTTCACACCTTGCAACTccagAGTTGGGAGAAAACAGTGGATTGCTATAGCCCGGGACAAGGTTTGATGCCTGCAAGTTTCAAAGTTAAAACTATGGTATTTGATGACAAAAAGACAGGAGAAGTTTTAGATCCTGATTTTGGAGAATCGGCTATTGGTCGTGTTGCTCCTGTTGATTCAGGATTGTGGTGGATCATTCTGCTTAGGGCTTATGGGAAACTCACTGGTGACTATACCTTGCAAGAAAAGTTAGAAGTTCAAACGGGTTTACAAATGATCATTAACTTGTGTTTATCAGATGGATTTGATATGTTTCCTTCTCTGTTAGTAACCGATGGATCTTGCATGATAGACAGAAGGATGGGTATTCATGGCCACCCTCTTGAGATTCAAGCATTATTTTACTCGGCTCTTCGCTCTGCGCGCGAAATGGTTGTTATGAATGATGAATCTAAGAATCTAGTTGGAGAAATTAACAACAGACTAAGTGCACTTTCTTTCCATATTAGAGAATATTATTGGTTGGATATGAGAAAAGTGAATGAGATTTATAGGTATAAAACAGAAGAATACTCTTTAGATGCAACTAACAAGTTCAACATTTATCCTGAACAAATTCCAATGTGGTTAATGGATTGGATTCCTGAGGAAGGTGGTTTTTTGATAGGAAATCTACAACCAGCTCACATGGATTTCAGGTTTTTCATGCTTGGAAATCTTTGGTCAATTGTTACATCTTTAGGTACACCAAAACAGAATAAGTCTGTTTTGAATCTCATAGAATCAAAATGGGATGATCTTGTTGGTGACATGCCTCTTAAGATATGTTATCCTGCCTTGGAGGCTGAAGAATGGCGCTTAATTACCGGCAGCGACCCTAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCTACCCTTCTCTGGCAGTTTACGCTGGCATGCATCAAAATGGGGAGAACTAATCTAGCTGAGAAGGCTGTTGGTATGTGTGAGAAAAGGCTTCCAATTGATTCTTGGCCAGAATATTATGACACAAAAACAGGAAGATTTATCGGAAAACAAGCACGACTTTTTCAAACATGGACATTGGCTGGGTTCCTTGCATCTAAGATGCTTTTGAAGAATCCTGAAATAGCAACCTTGCTATGCTGGGATGAAGATCTTGATATTCTTGAAACATGTGTTTGTACACTTAATAAGAGTGGCAGGACTAAATGTTCTCGTGATGCCGCGAAGTCGCACATTTTAGTGTGA 1938 0.3808 MTSINLISNCTMKPSSRILELGRKNSSFFSRCYHSLTMSTSFSNNPLVLNLDCKTKQYPSRVFEFKRVMNGFQQVLRLPSWNLGHSRTFLNLRATKTECVSSIGGVSFKAREFSNSVETKRGLRVGKDDNKGGGDDEEDLKEKNSKNGSVGKKKFDDEETEVEKEAWKLLQKALVTYCDTPVGTVAANDDSGSPLNYDQVFIRDFVPSALAFLLKGEHEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTMVFDDKKTGEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYTLQEKLEVQTGLQMIINLCLSDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVVMNDESKNLVGEINNRLSALSFHIREYYWLDMRKVNEIYRYKTEEYSLDATNKFNIYPEQIPMWLMDWIPEEGGFLIGNLQPAHMDFRFFMLGNLWSIVTSLGTPKQNKSVLNLIESKWDDLVGDMPLKICYPALEAEEWRLITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRTNLAEKAVGMCEKRLPIDSWPEYYDTKTGRFIGKQARLFQTWTLAGFLASKMLLKNPEIATLLCWDEDLDILETCVCTLNKSGRTKCSRDAAKSHILV 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04399 645 PANTHER ALKALINE/NEUTRAL INVERTASE 5 645 - -
Tsu07g04399 645 MobiDBLite consensus disorder prediction 121 157 - -
Tsu07g04399 645 Gene3D - 195 582 IPR012341 GO:0005975
Tsu07g04399 645 PANTHER - 5 645 IPR024746 GO:0033926
Tsu07g04399 645 Pfam Alkaline and neutral invertase 166 604 IPR024746 GO:0033926
Tsu07g04399 645 SUPERFAMILY Six-hairpin glycosidases 161 596 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04399 Tsu-Chr7 49174926 49177789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04399 - - mtr:MTR_7g111890 1100.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03586 01 43758990 43763067 Tsu07g04399 07 49174926 49177789 ECH
Tsu07g04399 07 49174926 49177789 Tsu07g04399 07 49174926 49177789 ECH
Tsu07g04399 07 49174926 49177789 Tsu01g03586 01 43758990 43763067 PCT