Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03586 ATGAACACAATAACCCTAATTCGTAACCGCGCCATAAATTCCGCGCGTAGAATCCTCATTGGTTCTAAGAATTCATCGATTTTTGTGTCCCCACTACCTCATCACGCTCTTCCTGTACCTAACCATTCTCTTCAACCACGTTTCAATCTTTACCACAGCAAAAATCACCACTCTTTTAAACAACTAGGGTTTCAGCATGAATTCGGTAGTATCCGGAAAATTTTCAATCCATCCTCTTCAAATTATTCAACTTCAAGGTGTTTTAGTTTAAATTCAGCAAAAGTTGGATTCAAGGTTCAAAATTTCTCAACTTCTGTTGAGACACGTGTTAATGACAATACTTTTGAGAAAATTTACATTCAGGGTGGGTTGAATGTGAAACAATTAGTGGTGGAAAGTGTTGATAAAGATGAAGAGAGTGTtgttagagaagaagaagaaagtgttgtGGAAAAACAAGCTTGGAAGTTGTTGAAGGATGCTATTGTTACTTATTGTGGAAATCCAGTGGGGACAGTTGCTGCAAATGATCCTGGTGATAAGCTACCATTGAATTATGATCAAGTGTTTATTCGGGATTTTATTCCTTCGGCGCTCGCTTTCTTGCTTAAAGGTGATAGTGAGATTGTTAAGTACTTTCTTCTTCATACCTTGCAATTGCAGAGTTGGGAGAAAACTGTGGACTGCTACAGTCCAGGACAGGGCTTGATGCCTGCTAGTTTCAAAGTTAGAACCGTAGCTCTTGAAGGAGATACTCGTGAAGAAGTTTTAGATCCTGATTTCGGGGAATCAGCTATTGGTCGAGTTGCGCCTGTAGATTCAGGATTGTGGTGGATCATCCTGTTGCGGGCTTATGGGAAGATCACTGGTGACTACAGCTTGCAAGAAAGGGTTGATGTTCAAACAGGCTTGAAAATGATTCTCAAATTGTGTCTAACAgatggttttgatatgtttCCATCTCTGCTAGTCACTGATGGGTCTTGCATGATAGACAGACGTATGGGCATTCATGGTCACCCTCTTGAAATCCAAGCGTTATTTTACTCGGCTCTTCGCTGCTCGCGTGAAATGCTTGCTGTAACTGATGGAACCAATGATCTTGTTAGAGCCATTAACAATAGATTGAGTGCATTATCGTTCCACATTAGGCAATATTATTGGGTGGATATGAAAAAGATTAATGAAATATACAGGTACAAAACTGAAGAGTACTCCATGGATGCCATTaacaaattcaacatatatCCAGAGCAAATTCCTTTCTGGGTAATGGACTGGATTCCAGAAAAAGGAGGATATCTAATTGGGAATCTGCAACCAGCTCACATGGATTTCCGGTTTTTCACCCTGGGAAATCTTTGGTCTATTATTTCGTCACTGAGCACCCCAAGACAGAACGAGGCTATTTTAAATCTGATAGAAGCAAAATGGGATGATCTCGTAGGGCATATGCCTCTTAAAATATGTTATCCTGCCTTGGATAATGAAGAGTGGCGGATAATTACTGGTAGTGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCAACCCTTCTGTGGCAGTTCACACTGGCATGCATGAAAATGGGGAGAATTGATCTAGCCCAGAAAGCAGTTGATTTGGCCGAGAAAAGGCTGCCAGTTGATTCTTGGCCTGAATATTACGATACTCGTTCTGGAAAATTTATTGGCAAACAAGCCCGGCTGTATCAAACATGGACCATAGCTGGGTTCCTTACATCCAAGATGCTTTTGAAGAATCCAAAAATGGCATCCATGTTATTTAGTGAGGAGGATTATGATCTCCTTGAGATATGTGTTTGTGGACTTAGCAAGAGTGGAAGGAAAAAATGCTCGCGTGTTGCTGCCAAATCTCAGATTCTTGTATGA 1905 0.399 MNTITLIRNRAINSARRILIGSKNSSIFVSPLPHHALPVPNHSLQPRFNLYHSKNHHSFKQLGFQHEFGSIRKIFNPSSSNYSTSRCFSLNSAKVGFKVQNFSTSVETRVNDNTFEKIYIQGGLNVKQLVVESVDKDEESVVREEEESVVEKQAWKLLKDAIVTYCGNPVGTVAANDPGDKLPLNYDQVFIRDFIPSALAFLLKGDSEIVKYFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVALEGDTREEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYSLQERVDVQTGLKMILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLAVTDGTNDLVRAINNRLSALSFHIRQYYWVDMKKINEIYRYKTEEYSMDAINKFNIYPEQIPFWVMDWIPEKGGYLIGNLQPAHMDFRFFTLGNLWSIISSLSTPRQNEAILNLIEAKWDDLVGHMPLKICYPALDNEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACMKMGRIDLAQKAVDLAEKRLPVDSWPEYYDTRSGKFIGKQARLYQTWTIAGFLTSKMLLKNPKMASMLFSEEDYDLLEICVCGLSKSGRKKCSRVAAKSQILV 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03586 634 Gene3D - 185 584 IPR012341 GO:0005975
Tsu01g03586 634 PANTHER ALKALINE/NEUTRAL INVERTASE A, MITOCHONDRIAL 6 634 - -
Tsu01g03586 634 Pfam Alkaline and neutral invertase 154 593 IPR024746 GO:0033926
Tsu01g03586 634 PANTHER - 6 634 IPR024746 GO:0033926
Tsu01g03586 634 SUPERFAMILY Six-hairpin glycosidases 162 585 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03586 Tsu-Chr1 43758990 43763067 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03586 - - gmx:100797025 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03586 01 43758990 43763067 Tsu07g04399 07 49174926 49177789 ECH
Tsu01g03586 01 43758990 43763067 Tsu01g03586 01 43758990 43763067 ECH
Tsu07g04399 07 49174926 49177789 Tsu01g03586 01 43758990 43763067 PCT