Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04394 ATGGCACCAGACATCACCACCGCAATCCTCAAGACCACCGTGGAGAAACCCAAAGTTGATGGTGGTAAAGGCCGTGCCTTTGTGACTTTCCTAGCTGGAAACGCTGATTACATAAAAGGTGTTGTTGGTTTAGCCAAAGGGTTAAGAAAAACCAAAACCATGTACCCTTTGGTTGTTGCAATTTTACCTGATGTTCCTCAAGAACATCGTAACATCCTTGTTTCACAAGGTTGCATTGTTAAGGAAATTGCTCCTGTTTATCCTCCACCTAACCAAACTCAATTTGCTATGGCTTATTATGTCATCAATTACTCCAAACTACGTATTTTTGAGTTTGAGGAGTATAGCAAGATGATATACCTAGATGGTGATATACAAGTTTTTGAAAACATTGACCAtctatttgatctacctgatgACTACTTCTATGCTGTGATGGACTGTTTTTGTGAGAAAACTTGGAGTCACACCCCTCAGTATAAGATTGGATACTGCCAACAGTGTCCTGATAAGGTTCAATGGCCTTCTGATTTTGGGCCCAAACCTCCTCTCTATTTCAATGCTGGAATGTTCGTTTTTCAGCCTAATGTTGCCACATACCATGATCTCCTTGAAAAAGTCAAAATTGTCAAACCAACTCCCTTTGCTGAACAgGACTTTTTGAACATGTATTTCAAGGATAAATACAAGCCTATACCTAATGTATACAATCTTGTCTTGGCTATGCTGTGGCGTCACCCTGAGAATGTTGAGCTAGAGAAAGTTCAAGTTGTTCACTATTGTGCTGCGGGGTCTAAACCATGGAGGTACACAGGGGAGGAACAGAACATGGATAGAGAAGACATAAAAATGttggtgaagaaatggaaagagaTATATGAAGATGAGACATTAGATTACAACAATAATGTTAGAGTGGAACGTTTCACAGCTGCACTATTAGAGGCTGGTGGGATTAAGTCAGTGCTCTCCCCAAATGCTGCTTAA 987 0.388 MAPDITTAILKTTVEKPKVDGGKGRAFVTFLAGNADYIKGVVGLAKGLRKTKTMYPLVVAILPDVPQEHRNILVSQGCIVKEIAPVYPPPNQTQFAMAYYVINYSKLRIFEFEEYSKMIYLDGDIQVFENIDHLFDLPDDYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVQWPSDFGPKPPLYFNAGMFVFQPNVATYHDLLEKVKIVKPTPFAEQDFLNMYFKDKYKPIPNVYNLVLAMLWRHPENVELEKVQVVHYCAAGSKPWRYTGEEQNMDREDIKMLVKKWKEIYEDETLDYNNNVRVERFTAALLEAGGIKSVLSPNAA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04394 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 325 - -
Tsu07g04394 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 28 297 IPR029044 -
Tsu07g04394 328 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Tsu07g04394 328 CDD GT8_Glycogenin 25 295 - -
Tsu07g04394 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 303 IPR029044 -
Tsu07g04394 328 PANTHER GALACTINOL SYNTHASE 2 1 325 IPR030515 GO:0006012|GO:0047216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04394 Tsu-Chr7 49155294 49157141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04394 1 328 Glycosyltransferase AT1G56600 73.373 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04394 K18819 - gmx:100800249 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04394 07 49155294 49157141 Tsu07g04394 07 49155294 49157141 ECH
Tsu07g04394 07 49155294 49157141 Tsu01g03588 01 43779500 43781043 PCT