Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04380 ATGGCAAATGCTTCTCTATGCTTCTTGTTCCTctcttttctcattttcttctgTTCTGGAAACAATGCATTTTCAACTTTTTCTGGAACCAGATTCCTTAAAAAAAGCAAGATCTCAAAGTCTCAGATTCAGTTTTCAACAAAAGATCATAATAAGATTGTGAGAATTCTACAAGACACAGGTTTCCCTACAAATCCAGCATCAACTACACCTTCAGAAACACCAACAATAATCACAGTTCCATCAACAAATCCTGTCCCAGTTTCACCAACAAATCCAGGTGCAACAAATCTTGTTCCTTCTACTACACCACCTGTTTCATCAGCACCACCAACAAATCCAGCAAATACACCAGTACCTGTTACAAATCCTGTTACAGCTCCTATAACAGTTCCAGGAACAAACCCTGTGAATTCTTATCCACCACCATCACCATTATCATCAGGAACAGGAACAGTTCCTGTGACAAATCCTCCACCTACAAGCACAGGTACAAATCCTCAACCTTCTCAAGGAGGAGGTAGTTGGTGTGTGGCTAAACCTGGAACACCACAAACTACACTTCAAACAGCATTGGATTATGCTTGTGGAAAAGGTGCTGATTGTTCACAGATACAACAAGGTGGAAGCTGTTATAATCCAAATTCACTTCAAAATCATGCTTCTTTTGCTTTCAATAGTTACTACCAAAAGAATCCTGCTTCTACTAGCTGTGACTTTGGAGGGGTTGCTGCTATTGTTAGCATAAATCCAAGTACTGGAACTTGCATCTTCCCATCATCTTCAGGAGGAGGAGCAGGCACACCGGCCGGCGGCTCCACCGGTACTACCTCACCTTCATTTGGTATGGGGCCTCAAAGCTCTCCACTGGATTCCTCTCATTCAACCGGCCTGAGACCTTTCATAAGCTGCATGGTTCTGGTGACATTATTTGTCAGTGGAAAACTCTTTACGAGTCCATAG 963 0.4164 MANASLCFLFLSFLIFFCSGNNAFSTFSGTRFLKKSKISKSQIQFSTKDHNKIVRILQDTGFPTNPASTTPSETPTIITVPSTNPVPVSPTNPGATNLVPSTTPPVSSAPPTNPANTPVPVTNPVTAPITVPGTNPVNSYPPPSPLSSGTGTVPVTNPPPTSTGTNPQPSQGGGSWCVAKPGTPQTTLQTALDYACGKGADCSQIQQGGSCYNPNSLQNHASFAFNSYYQKNPASTSCDFGGVAAIVSINPSTGTCIFPSSSGGGAGTPAGGSTGTTSPSFGMGPQSSPLDSSHSTGLRPFISCMVLVTLFVSGKLFTSP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04380 320 MobiDBLite consensus disorder prediction 82 103 - -
Tsu07g04380 320 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 64 273 - -
Tsu07g04380 320 Gene3D - 173 261 - -
Tsu07g04380 320 MobiDBLite consensus disorder prediction 144 159 - -
Tsu07g04380 320 MobiDBLite consensus disorder prediction 267 294 - -
Tsu07g04380 320 MobiDBLite consensus disorder prediction 104 118 - -
Tsu07g04380 320 MobiDBLite consensus disorder prediction 82 175 - -
Tsu07g04380 320 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 64 273 IPR044965 GO:0004553|GO:0005975
Tsu07g04380 320 MobiDBLite consensus disorder prediction 119 134 - -
Tsu07g04380 320 Pfam X8 domain 176 244 IPR012946 -
Tsu07g04380 320 SMART X8_cls 175 258 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04380 Tsu-Chr7 49062631 49065739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04380 144 260 Glycoside Hydrolase AT4G26830 45.378 7.90e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04380 - - gmx:100789503 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04380 07 49062631 49065739 Tsu07g04380 07 49062631 49065739 ECH
Tsu07g04380 07 49062631 49065739 Tsu01g03595 01 43829284 43832237 PCT