Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03595 ATGGCCAAGGAAGCTTCTTTCAGCCTCTtgattctctcttctctcttaaTTTCATGTTCTGGAGTTTTGGTTGGTTTTTCCTATCATGAGAGAGGAGATACTTGGACATCATTCCTCCAGCAGAGTAAAGTTTCTTCGTCTCAGATTCGAGTTCTCGTCACAGATCATAGGATTTTGAGCACTCTTACCGACTCAAATGTGTTAGTTGATCTTTACTTAAACAAAAGCCAAGTTGAAAATTTCATTACTTCTAAACCTTCAGCAATTTCTGAGCTAAAAGTTCAGCTTATCCTTCCacatttaaacatcaaaagcatCATTGCTAGCTGTGGAAGTGAGTGCTTAGTCCAAAATAAGATGCATTTGATTATGCATGCTCttaaatcaattcattcaattctcAGAGATCTTCACATAGGTAACGAAGTAAAAGTCTCGGTTGCATTTCCACTTCAATTCTTAAGGAAGTTGAGTACATCACAGGAACACAAACTCTGTAGGCTACTTTCATTTATAAAGGAAACAAAATCGTTTGTGACGATAGAAGACTCCATTGATGGGGAATTAAGCATGGGGGAACATTTTGTTCAAACTATTATCGAACGAGCTGCTCTtgcttcttctgttcttccttGCAATGATGTTCCTGTGGTGCTTACAATCAAGAGTTCAGTTATACCAAGTTCAATAGAAGTAGCTCAATTTAGTAAAAGAGTATCCAAATATTTAGAAGCAAGAAGTCCTATTGCAAAAAGATTATCTGCATTATATGTAGAGCTTCATGCAACAGAAGATTTTTCAATGAAAGAGCTTAAAAGGGAAGAGGAAGAAATGTTTCCTTTGTCTAGAAGAGAGACCTTAAGCAAATTCCACAGAAGAAAAACTCTAGATGGCACAAACAGTCCAACAAACACAGTTTATCCGACAAATCCACCACCGGTTGTTGTGACACCCTCAGATACACCAACCATTATATCAGTTCCTTCCACCACCAATCCTGTCACAATTTCCCCTACAAATCCAGCTGCAATGCCTGTAACAGTTCCTTCTACCACACCTGCTGTTCCTTTACCTCCAACAAATCCAACCAATACACCGGTTCCTGTCTTCAATCCAGCTACAACACCTTCGACAGTTCCAGGTATACAACCAGTAACCAACCCTGTGACATCTTATCCACCTCCATCAGGAAATGTTCCTGTTGTAAATCCTCAACAGCCACCTCCTTCAAGCACAAATGCTCCTTCCATTCAAGGACAGAGTTGGTGTGTGGCGAAATCAGGTGCTCCACAAGCGTCCCTTCAATCGGCGTTGGATTATGCGTGTGGAATGGGTGGTGCTGACTGTTCTCAAATACAGCAGGGTGCTAGTTGTTACAGTCCAGTCACTTTGCAGAACCACGCTTCTTTTGCCTTCAACAGTTACTATCAAAAGAATCCATCTCCAACAAGTTGCAACTTTGGAGGCGCTGCCATGTTAGTTAACTCAAATCCAAgttCTGGTTCTTGCGTTTTTCCATCATCATCGTCGTCAACATCATCCTCAACGCCGCCAATGATATCATCGCCAACACCACCTACACAATCAATTCCAACTTCAACACCGCCGCCAAGTCTAACAACACCTTCATCATCTATTCCAACAATAGCTCCCCCATCAATTCCAACAGCTCCACCAACATCTTCAGGATCAGGCACTTTCGGCTATGGTGCCCCACCTTCAGTGTTAAATTCAAGCAACCCAGCTTCAGGTTCAATGCCTGATTTTGGATCCGATAGCCCTCCTGTTGTAAACACAACGACGGCCTCGCACTCTCTAGCTCTGAAACCTTCTACTGGCTGCATAGTTCTGATGATTTCATTTGCCACTGCAAGACTCAGCATGCGCCCATAG 1893 0.4073 MAKEASFSLLILSSLLISCSGVLVGFSYHERGDTWTSFLQQSKVSSSQIRVLVTDHRILSTLTDSNVLVDLYLNKSQVENFITSKPSAISELKVQLILPHLNIKSIIASCGSECLVQNKMHLIMHALKSIHSILRDLHIGNEVKVSVAFPLQFLRKLSTSQEHKLCRLLSFIKETKSFVTIEDSIDGELSMGEHFVQTIIERAALASSVLPCNDVPVVLTIKSSVIPSSIEVAQFSKRVSKYLEARSPIAKRLSALYVELHATEDFSMKELKREEEEMFPLSRRETLSKFHRRKTLDGTNSPTNTVYPTNPPPVVVTPSDTPTIISVPSTTNPVTISPTNPAAMPVTVPSTTPAVPLPPTNPTNTPVPVFNPATTPSTVPGIQPVTNPVTSYPPPSGNVPVVNPQQPPPSSTNAPSIQGQSWCVAKSGAPQASLQSALDYACGMGGADCSQIQQGASCYSPVTLQNHASFAFNSYYQKNPSPTSCNFGGAAMLVNSNPSSGSCVFPSSSSSTSSSTPPMISSPTPPTQSIPTSTPPPSLTTPSSSIPTIAPPSIPTAPPTSSGSGTFGYGAPPSVLNSSNPASGSMPDFGSDSPPVVNTTTASHSLALKPSTGCIVLMISFATARLSMRP 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03595 630 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Tsu01g03595 630 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 137 595 IPR044965 GO:0004553|GO:0005975
Tsu01g03595 630 SMART X8_cls 421 505 IPR012946 -
Tsu01g03595 630 Gene3D - 416 517 - -
Tsu01g03595 630 MobiDBLite consensus disorder prediction 519 558 - -
Tsu01g03595 630 MobiDBLite consensus disorder prediction 559 592 - -
Tsu01g03595 630 MobiDBLite consensus disorder prediction 294 316 - -
Tsu01g03595 630 MobiDBLite consensus disorder prediction 504 518 - -
Tsu01g03595 630 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 137 595 - -
Tsu01g03595 630 MobiDBLite consensus disorder prediction 504 592 - -
Tsu01g03595 630 Pfam X8 domain 422 492 IPR012946 -
Tsu01g03595 630 Gene3D Glycosidases 24 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03595 Tsu-Chr1 43829284 43832237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03595 384 508 Glycoside Hydrolase AT2G05790 49.612 5.27e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03595 - - cam:101499863 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03595 01 43829284 43832237 Tsu01g03595 01 43829284 43832237 ECH
Tsu07g04380 07 49062631 49065739 Tsu01g03595 01 43829284 43832237 PCT